Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | A6J61_RS03005 | Genome accession | NZ_CP020406 |
| Coordinates | 646389..646790 (+) | Length | 133 a.a. |
| NCBI ID | WP_002461219.1 | Uniprot ID | A0A853V538 |
| Organism | Staphylococcus lugdunensis strain FDAARGOS_222 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 641389..651790
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6J61_RS02980 (A6J61_02980) | - | 642674..643075 (+) | 402 | WP_002461226.1 | F0F1 ATP synthase subunit epsilon | - |
| A6J61_RS02985 (A6J61_02985) | - | 643213..643446 (+) | 234 | WP_002478965.1 | DUF1146 family protein | - |
| A6J61_RS02990 (A6J61_02990) | murA | 643610..644875 (+) | 1266 | WP_002461223.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| A6J61_RS02995 (A6J61_02995) | fabZ | 644912..645352 (+) | 441 | WP_002461222.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| A6J61_RS03000 (A6J61_03000) | - | 645748..646200 (-) | 453 | WP_080606538.1 | YwpF-like family protein | - |
| A6J61_RS03005 (A6J61_03005) | ssb | 646389..646790 (+) | 402 | WP_002461219.1 | single-stranded DNA-binding protein | Machinery gene |
| A6J61_RS03010 (A6J61_03010) | - | 647269..647976 (+) | 708 | WP_062077890.1 | transglycosylase family protein | - |
| A6J61_RS03015 (A6J61_03015) | tenA | 648389..649066 (+) | 678 | WP_070647980.1 | thiaminase II | - |
| A6J61_RS03020 (A6J61_03020) | thiD | 649071..649892 (+) | 822 | WP_002478968.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| A6J61_RS03025 (A6J61_03025) | thiM | 649885..650673 (+) | 789 | WP_080606539.1 | hydroxyethylthiazole kinase | - |
| A6J61_RS03030 (A6J61_03030) | thiE | 650676..651314 (+) | 639 | WP_002461213.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 133 a.a. Molecular weight: 15388.56 Da Isoelectric Point: 6.7151
>NTDB_id=222288 A6J61_RS03005 WP_002461219.1 646389..646790(+) (ssb) [Staphylococcus lugdunensis strain FDAARGOS_222]
MLNKIVIVGRLTKDAQIYEKEEVKIATFCVATERNYKDDNNEQIVDYILCKAYGRTATNIEKYTSQGSLVGITGQMRSRK
YTKDQQTHFVTELYVETIKFMSSKGKTHEILEEHPTTNIQPFSVDEMKLLNIE
MLNKIVIVGRLTKDAQIYEKEEVKIATFCVATERNYKDDNNEQIVDYILCKAYGRTATNIEKYTSQGSLVGITGQMRSRK
YTKDQQTHFVTELYVETIKFMSSKGKTHEILEEHPTTNIQPFSVDEMKLLNIE
Nucleotide
Download Length: 402 bp
>NTDB_id=222288 A6J61_RS03005 WP_002461219.1 646389..646790(+) (ssb) [Staphylococcus lugdunensis strain FDAARGOS_222]
ATGTTAAATAAAATCGTAATCGTTGGACGATTAACTAAAGATGCCCAAATATACGAGAAAGAGGAGGTTAAAATTGCTAC
ATTTTGTGTGGCTACGGAAAGAAATTATAAAGATGATAACAACGAGCAAATCGTAGATTATATTCTATGTAAAGCATATG
GTAGGACTGCTACCAACATTGAAAAGTATACCAGTCAGGGATCATTGGTTGGTATTACAGGTCAAATGCGCTCAAGAAAG
TATACTAAAGACCAACAAACACATTTTGTTACAGAATTATACGTAGAAACTATTAAATTCATGTCCTCTAAAGGCAAAAC
ACACGAAATCCTCGAAGAACATCCAACTACTAATATTCAACCTTTTTCAGTTGATGAAATGAAACTCTTAAATATCGAAT
AA
ATGTTAAATAAAATCGTAATCGTTGGACGATTAACTAAAGATGCCCAAATATACGAGAAAGAGGAGGTTAAAATTGCTAC
ATTTTGTGTGGCTACGGAAAGAAATTATAAAGATGATAACAACGAGCAAATCGTAGATTATATTCTATGTAAAGCATATG
GTAGGACTGCTACCAACATTGAAAAGTATACCAGTCAGGGATCATTGGTTGGTATTACAGGTCAAATGCGCTCAAGAAAG
TATACTAAAGACCAACAAACACATTTTGTTACAGAATTATACGTAGAAACTATTAAATTCATGTCCTCTAAAGGCAAAAC
ACACGAAATCCTCGAAGAACATCCAACTACTAATATTCAACCTTTTTCAGTTGATGAAATGAAACTCTTAAATATCGAAT
AA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
69.697 |
99.248 |
0.692 |
| ssb | Staphylococcus aureus MW2 |
68.939 |
99.248 |
0.684 |