Detailed information    

insolico Bioinformatically predicted

Overview


Name   dsbA2   Type   Machinery gene
Locus tag   A6J54_RS01000 Genome accession   NZ_CP020402
Coordinates   167465..168160 (-) Length   231 a.a.
NCBI ID   WP_080541858.1    Uniprot ID   -
Organism   Neisseria meningitidis strain FDAARGOS_215     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 162465..173160
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J54_RS00990 (A6J54_00950) - 164735..165541 (-) 807 WP_013449598.1 inner membrane protein YpjD -
  A6J54_RS00995 (A6J54_00955) ffh 165761..167131 (+) 1371 WP_080541857.1 signal recognition particle protein -
  A6J54_RS01000 (A6J54_00960) dsbA2 167465..168160 (-) 696 WP_080541858.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  A6J54_RS01005 (A6J54_00965) - 168275..170386 (-) 2112 WP_080541859.1 TonB-dependent siderophore receptor -
  A6J54_RS01010 (A6J54_00975) - 170674..171565 (-) 892 Protein_154 IS5 family transposase -
  A6J54_RS01015 (A6J54_00980) - 171689..172294 (-) 606 WP_080541860.1 nitroreductase family protein -
  A6J54_RS01020 (A6J54_00985) - 172343..172741 (-) 399 WP_002216361.1 DoxX family protein -

Sequence


Protein


Download         Length: 231 a.a.        Molecular weight: 25447.95 Da        Isoelectric Point: 5.1502

>NTDB_id=222197 A6J54_RS01000 WP_080541858.1 167465..168160(-) (dsbA2) [Neisseria meningitidis strain FDAARGOS_215]
MKLKTLALTSLTLLALAACSKQAETSVPADSAQSSSSAPAAPAELNEGVNYTVLSTPIPQQQAGKIEVLEFFGYFCPHCA
HLEPVLSEHIKTFKDDTYMRREHVVWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADIDTLKKWLSEQTAF
DGKKVLAAFEAPESQARSAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQLVDKVREEQKKPQ

Nucleotide


Download         Length: 696 bp        

>NTDB_id=222197 A6J54_RS01000 WP_080541858.1 167465..168160(-) (dsbA2) [Neisseria meningitidis strain FDAARGOS_215]
ATGAAACTGAAAACCTTAGCTTTGACTTCATTGACCCTGTTGGCATTGGCCGCTTGTAGCAAACAGGCTGAAACCAGTGT
TCCGGCAGACAGCGCCCAAAGCAGCTCATCTGCTCCGGCAGCCCCTGCTGAGTTGAACGAAGGTGTGAACTACACTGTAT
TGTCTACGCCTATTCCGCAACAGCAGGCCGGTAAAATCGAAGTATTGGAATTTTTCGGCTACTTCTGCCCGCATTGCGCC
CATCTTGAGCCGGTCTTGAGCGAGCACATCAAAACGTTTAAAGACGATACCTATATGCGCCGGGAGCATGTCGTGTGGGG
TGATGAAATGAAACCTTTGGCACGTTTGGCGGCCGCAGTGGAAATGGCCGGTGAATCAGATAAAGCCAACAGCCATATTT
TCGATGCGATGGTTAATCAAAAAATCAATCTGGCTGATATCGATACCCTGAAAAAATGGCTGTCCGAGCAAACAGCGTTT
GACGGCAAAAAAGTATTGGCTGCATTTGAGGCTCCTGAAAGCCAAGCGCGTTCGGCTCAAATGGAAGAGTTGACCAATAA
ATTCCAAATCAGCGGCACACCGACTGTGATCGTCGGCGGCAAATACCAAGTTGAATTTAAAGACTGGCAGTCTGGTATGA
CCACGATTGACCAGTTGGTGGATAAAGTACGCGAAGAGCAGAAAAAGCCGCAATAA

Domains


Predicted by InterproScan.

(65-212)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

99.134

100

0.991

  dsbA1 Neisseria meningitidis MC58

70.815

100

0.714


Multiple sequence alignment