Detailed information NTG0222195

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: A6J54_RS00740
• Genome accession: NZ_CP020402
• Coordinates: 129515..130375 (+)
• Length: 286 a.a.
• NCBI ID: WP_002221969.1
• Uniprot ID: -
• Organism: Neisseria meningitidis strain FDAARGOS_215
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 124515..135375

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A6J54_RS00715 (A6J54_00680)	dapD	125025..125846 (-)	822	WP_002216408.1	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	-
A6J54_RS00720 (A6J54_00685)	-	125856..126086 (-)	231	WP_025462714.1	hypothetical protein	-
A6J54_RS00725 (A6J54_00690)	pgi	126056..127699 (-)	1644	WP_002220279.1	glucose-6-phosphate isomerase	-
A6J54_RS00735 (A6J54_00695)	pilG	128209..129441 (+)	1233	WP_002216405.1	type 4 pilus assembly protein PilG	Machinery gene
A6J54_RS00740 (A6J54_00700)	pilD	129515..130375 (+)	861	WP_002221969.1	A24 family peptidase	Machinery gene
A6J54_RS00745 (A6J54_00705)	coaE	130377..131009 (+)	633	WP_002243235.1	dephospho-CoA kinase	-
A6J54_RS00750 (A6J54_00710)	-	131002..131211 (+)	210	WP_002212333.1	DNA gyrase inhibitor YacG	-
A6J54_RS00755 (A6J54_00715)	pilF	131296..132972 (-)	1677	WP_080541848.1	type IV-A pilus assembly ATPase PilB	Machinery gene
A6J54_RS00775 (A6J54_00725)	-	133463..133909 (-)	447	WP_014581766.1	DUF441 domain-containing protein	-
A6J54_RS00780 (A6J54_00730)	ispB	133913..134887 (-)	975	WP_002235439.1	octaprenyl diphosphate synthase	-

Sequence

Protein

• Length: 286 a.a.
• Molecular weight: 31302.40 Da
• Isoelectric Point: 8.9527

>NTDB_id=222195 A6J54_RS00740 WP_002221969.1 129515..130375(+) (pilD) [Neisseria meningitidis strain FDAARGOS_215]
MSDLSVLSPFAVPLAAVFGLLVGSFLNVVIYRVPVMMERGWTVFAKKHLNLPLTEEESRTFNLMKPDSCCPKCRVPIRAR
QNIPIVSYLLLRGKCASCQTKISIRYPLIELLTGVLFGLVAWQYGWSWITLGGLILTAFLISLTFIDADTQYLPDSMTLP
LIWLGLIFNLDGGFVPLQSAVLGAVAGYGSIWLLCAVYKLIKGEIGMGNGDFKLIAALGAWLGISALPVLIFVSSLIGLV
AAIVMRVAKGQHFAFGPALTVSGWIIFTANDSVWRAVNWWLTHPVL

Nucleotide

• Length: 861 bp

>NTDB_id=222195 A6J54_RS00740 WP_002221969.1 129515..130375(+) (pilD) [Neisseria meningitidis strain FDAARGOS_215]
ATGTCTGATTTGTCTGTATTGTCGCCGTTTGCCGTGCCTTTGGCAGCGGTGTTCGGGCTGCTGGTCGGCAGTTTCTTAAA
CGTCGTCATTTACCGCGTGCCGGTCATGATGGAACGCGGCTGGACGGTATTTGCCAAAAAACATTTAAACCTGCCGCTGA
CCGAAGAGGAAAGCCGTACCTTCAACCTGATGAAACCGGATTCCTGCTGTCCCAAATGTCGCGTGCCGATACGCGCGCGG
CAGAACATCCCGATTGTCAGCTACCTGCTCCTGCGCGGCAAATGCGCTTCCTGCCAAACCAAAATCAGCATACGTTATCC
CTTAATCGAGCTGCTGACCGGCGTATTGTTCGGGCTGGTTGCCTGGCAATACGGCTGGTCTTGGATTACATTGGGCGGTT
TGATACTGACCGCGTTTCTGATTTCCCTGACCTTTATCGATGCGGACACCCAATACCTGCCCGACTCGATGACCTTACCC
TTGATTTGGCTGGGGCTGATATTTAATTTGGACGGCGGCTTCGTGCCTTTGCAGTCTGCCGTTTTAGGTGCGGTTGCCGG
CTATGGTTCGATATGGCTTTTATGCGCGGTATATAAACTGATTAAAGGCGAAATCGGTATGGGCAACGGAGATTTCAAAC
TGATTGCCGCATTGGGCGCGTGGCTCGGCATATCCGCATTGCCCGTGCTGATTTTTGTTTCCTCGCTGATCGGTTTGGTC
GCGGCAATCGTTATGCGCGTCGCCAAGGGGCAGCATTTTGCCTTCGGCCCCGCACTGACAGTTTCGGGCTGGATAATTTT
TACGGCAAACGATTCCGTATGGCGGGCGGTCAACTGGTGGCTGACCCATCCGGTGCTGTAA

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (17-124)

• Type IV leader peptidase family (Peptidase_A24) (134-242)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Neisseria gonorrhoeae MS11	95.789	99.65	0.955
pilD	Vibrio cholerae strain A1552	44.444	100	0.448
pilD	Vibrio campbellii strain DS40M4	44.928	96.503	0.434
pilD	Acinetobacter baumannii D1279779	46.97	92.308	0.434
pilD	Acinetobacter nosocomialis M2	46.97	92.308	0.434