Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   C2H94_RS04530 Genome accession   NZ_CP026034
Coordinates   817221..817916 (-) Length   231 a.a.
NCBI ID   WP_038828831.1    Uniprot ID   -
Organism   Bacillus subtilis strain PK5_52     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 812221..822916
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H94_RS04510 (C2H94_04475) yttA 812648..813394 (+) 747 WP_014477720.1 LMBR1 domain-containing protein -
  C2H94_RS04515 (C2H94_04480) bceB 813431..815371 (-) 1941 WP_141949772.1 bacitracin ABC transporter permease BceB -
  C2H94_RS04520 (C2H94_04485) bceA 815361..816122 (-) 762 WP_103803281.1 bacitracin ABC transporter ATP-binding protein BceA -
  C2H94_RS04525 (C2H94_04490) bceS 816224..817228 (-) 1005 WP_141949774.1 two-component sensor histidine kinase BceS -
  C2H94_RS04530 (C2H94_04495) braR 817221..817916 (-) 696 WP_038828831.1 two-component response regulator BceR Regulator
  C2H94_RS04535 (C2H94_04500) ytrF 818013..819323 (-) 1311 WP_049140981.1 ABC transporter permease YtrF -
  C2H94_RS04540 (C2H94_04505) ytrE 819313..820008 (-) 696 WP_047183063.1 ABC transporter ATP-binding protein YtrE -
  C2H94_RS04545 (C2H94_04510) ytrD 820023..821000 (-) 978 WP_072175871.1 ABC transporter permease YtrD -
  C2H94_RS04550 (C2H94_04515) ytrC 821030..822016 (-) 987 WP_015483589.1 ABC transporter permease YtrC -
  C2H94_RS04555 (C2H94_04520) ytrB 822010..822888 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26923.80 Da        Isoelectric Point: 5.3775

>NTDB_id=222175 C2H94_RS04530 WP_038828831.1 817221..817916(-) (braR) [Bacillus subtilis strain PK5_52]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRQIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLEVLQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=222175 C2H94_RS04530 WP_038828831.1 817221..817916(-) (braR) [Bacillus subtilis strain PK5_52]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCAGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATCCAAAAGCCATTTCATTTTGATGT
GCTGATTGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAGATGTTCATT
CTTAAACAACTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGAGGTCCTGCAGCTAGGTGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(5-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377

Multiple sequence alignment