Detailed information    

insolico Bioinformatically predicted

Overview


Name   dsbA2   Type   Machinery gene
Locus tag   A6J53_RS05100 Genome accession   NZ_CP020401
Coordinates   821714..822409 (+) Length   231 a.a.
NCBI ID   WP_002256352.1    Uniprot ID   A0A378WB04
Organism   Neisseria meningitidis strain FDAARGOS_214     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 816714..827409
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J53_RS05080 (A6J53_04975) - 817231..818142 (-) 912 WP_002216359.1 LysR family transcriptional regulator -
  A6J53_RS05085 (A6J53_04980) - 818250..818648 (+) 399 WP_002216361.1 DoxX family protein -
  A6J53_RS05090 (A6J53_04985) - 818697..819302 (+) 606 WP_002215700.1 nitroreductase family protein -
  A6J53_RS05095 (A6J53_04990) - 819488..821599 (+) 2112 WP_002256351.1 TonB-dependent siderophore receptor -
  A6J53_RS05100 (A6J53_04995) dsbA2 821714..822409 (+) 696 WP_002256352.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  A6J53_RS05110 (A6J53_05000) ffh 822743..824113 (-) 1371 WP_002256353.1 signal recognition particle protein -
  A6J53_RS05115 (A6J53_05005) - 824333..825139 (+) 807 WP_002236666.1 inner membrane protein YpjD -

Sequence


Protein


Download         Length: 231 a.a.        Molecular weight: 25460.01 Da        Isoelectric Point: 5.1502

>NTDB_id=222160 A6J53_RS05100 WP_002256352.1 821714..822409(+) (dsbA2) [Neisseria meningitidis strain FDAARGOS_214]
MKLKTLALTSLTLLALAACSKQAETSVPADSVQSSSSAPAAPAELNEGVNYTVLSTPIPQQQAGKIEVLEFFGYFCPHCA
HLEPVLSEHIKTFKDDTYMRREHVVWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADIDTLKKWLSEQTAF
DGKKVLAAFEAPESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQLVDKVREEQKKPQ

Nucleotide


Download         Length: 696 bp        

>NTDB_id=222160 A6J53_RS05100 WP_002256352.1 821714..822409(+) (dsbA2) [Neisseria meningitidis strain FDAARGOS_214]
ATGAAACTGAAAACCTTAGCTTTGACTTCATTGACCCTGTTGGCATTGGCCGCTTGTAGCAAACAGGCTGAAACCAGCGT
TCCGGCAGACAGCGTCCAAAGCAGCTCATCTGCTCCGGCAGCCCCTGCTGAGTTGAACGAAGGTGTGAACTACACTGTAT
TGTCTACGCCTATTCCGCAACAGCAGGCCGGTAAAATCGAAGTATTGGAATTTTTCGGCTACTTCTGCCCGCATTGCGCC
CATCTTGAGCCGGTCTTGAGCGAGCACATCAAAACGTTTAAAGACGATACCTATATGCGCCGGGAGCATGTCGTGTGGGG
TGATGAAATGAAACCTTTGGCACGTTTGGCGGCCGCAGTGGAAATGGCCGGTGAATCAGATAAAGCCAACAGCCATATTT
TCGATGCGATGGTTAATCAAAAAATCAATCTGGCTGATATCGATACCCTGAAAAAATGGCTGTCCGAGCAAACAGCGTTT
GACGGCAAAAAAGTATTGGCTGCATTTGAGGCTCCTGAAAGCCAAGCGCGTGCGGCTCAAATGGAAGAGTTGACCAATAA
ATTCCAAATCAGCGGCACACCGACTGTGATTGTCGGCGGCAAATACCAAGTTGAATTTAAAGACTGGCAGTCCGGTATGA
CCACGATTGACCAGTTGGTGGATAAAGTACGCGAAGAGCAGAAAAAGCCGCAATAA

Domains


Predicted by InterproScan.

(65-212)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A378WB04

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

99.134

100

0.991

  dsbA1 Neisseria meningitidis MC58

70.815

100

0.714


Multiple sequence alignment