Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   C2H91_RS15095 Genome accession   NZ_CP026030
Coordinates   3044950..3045810 (+) Length   286 a.a.
NCBI ID   WP_032677058.1    Uniprot ID   C0JBN8
Organism   Bacillus subtilis strain PK3_9     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3039950..3050810
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H91_RS15065 (C2H91_15100) pncA 3040414..3040965 (+) 552 WP_021480500.1 isochorismatase family cysteine hydrolase -
  C2H91_RS15070 (C2H91_15105) pncB 3040981..3042453 (+) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  C2H91_RS15075 (C2H91_15110) pdeH 3042590..3043819 (+) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  C2H91_RS15080 (C2H91_15115) - 3043795..3044163 (-) 369 WP_017695529.1 hypothetical protein -
  C2H91_RS15085 - 3044341..3044403 (-) 63 Protein_2936 hypothetical protein -
  C2H91_RS15090 (C2H91_15120) degQ 3044625..3044765 (+) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  C2H91_RS15095 (C2H91_15125) comQ 3044950..3045810 (+) 861 WP_032677058.1 polyprenyl synthetase family protein Regulator
  C2H91_RS15100 (C2H91_15130) comX 3045825..3045986 (+) 162 WP_049140565.1 competence pheromone ComX -
  C2H91_RS15105 (C2H91_15135) comP 3045994..3048291 (+) 2298 WP_141949158.1 histidine kinase Regulator
  C2H91_RS15110 (C2H91_15140) comA 3048372..3049016 (+) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  C2H91_RS15115 (C2H91_15145) yuxO 3049035..3049415 (+) 381 WP_017695528.1 hotdog fold thioesterase -
  C2H91_RS15120 (C2H91_15150) mnhG 3049454..3049828 (-) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  C2H91_RS15125 (C2H91_15155) mrpF 3049812..3050096 (-) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  C2H91_RS15130 (C2H91_15160) mrpE 3050096..3050572 (-) 477 WP_003228815.1 Na+/H+ antiporter subunit E -

Sequence


Protein


Download         Length: 286 a.a.        Molecular weight: 32483.40 Da        Isoelectric Point: 4.6790

>NTDB_id=222092 C2H91_RS15095 WP_032677058.1 3044950..3045810(+) (comQ) [Bacillus subtilis strain PK3_9]
MKEIVSQKIMNQDLERYLQNFIESKDTFEFADLALHHYLAFNGQDQKAIELLAAGIELLILSFDIYDDLEDQDNGSAVWM
KIDSSIALNAVTALYTLSIQVMCQASHEPEFSQEILNFALQSIQGQHDDIVNAPQTEEACLEMIKNKSGALTALPCVMGV
MLATGKYHPIVASYSYELGIISQIDNDYKGLFYLNNDFVQKKNTLAYLYLKKQFNDASAELLSLYQKPEEFVSINTKALK
RKLTEAGVIQYLLVMKHLSLQKIKNEMSQLKLEEDKTEKLLSVMIK

Nucleotide


Download         Length: 861 bp        

>NTDB_id=222092 C2H91_RS15095 WP_032677058.1 3044950..3045810(+) (comQ) [Bacillus subtilis strain PK3_9]
ATGAAGGAGATTGTAAGCCAAAAAATAATGAATCAGGACTTGGAACGATATCTTCAGAATTTTATTGAGTCTAAGGATAC
GTTTGAGTTTGCCGATTTGGCTCTTCATCATTATTTAGCTTTTAACGGTCAGGACCAAAAAGCAATCGAATTGCTAGCTG
CCGGAATTGAATTGCTTATACTCTCATTCGATATTTATGATGACTTAGAGGATCAAGATAATGGAAGTGCTGTCTGGATG
AAGATTGACTCGTCAATCGCTTTAAATGCAGTTACAGCTCTTTACACCCTAAGTATACAAGTGATGTGTCAAGCTAGTCA
TGAACCAGAATTTTCACAAGAGATATTGAATTTTGCGTTACAATCAATTCAAGGCCAGCATGATGATATTGTGAATGCGC
CGCAAACGGAAGAAGCCTGTCTTGAAATGATCAAAAATAAATCAGGAGCGCTAACGGCATTGCCCTGTGTAATGGGAGTA
ATGCTGGCAACAGGCAAATACCATCCCATTGTAGCTTCATATTCTTATGAACTTGGGATTATTTCACAGATCGATAATGA
TTATAAAGGTTTGTTTTACTTAAATAACGATTTTGTTCAGAAAAAAAATACATTGGCATACTTATACTTAAAGAAACAAT
TTAACGATGCTTCAGCGGAGCTACTAAGTTTATATCAAAAACCAGAGGAATTTGTTTCTATTAATACTAAGGCTTTGAAG
CGAAAATTGACAGAAGCAGGCGTTATACAATATTTACTGGTGATGAAACATTTATCTCTCCAAAAAATAAAAAATGAAAT
GTCACAATTAAAACTAGAAGAAGATAAAACTGAAAAATTATTGTCTGTTATGATTAAATAA

Domains


Predicted by InterProScan.

(39-229)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB C0JBN8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

44.84

98.252

0.441


Multiple sequence alignment