Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   C2H91_RS10580 Genome accession   NZ_CP026030
Coordinates   2130217..2131011 (+) Length   264 a.a.
NCBI ID   WP_003226939.1    Uniprot ID   A0ABU0V6L5
Organism   Bacillus subtilis strain PK3_9     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2125217..2136011
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H91_RS10560 (C2H91_10570) walR 2125459..2126166 (+) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -
  C2H91_RS10565 (C2H91_10575) walK 2126174..2128009 (+) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  C2H91_RS10570 (C2H91_10580) walH 2127999..2129366 (+) 1368 WP_032722849.1 WalRK two-component regulatory system regulator WalH -
  C2H91_RS10575 (C2H91_10585) walI 2129353..2130195 (+) 843 WP_003244037.1 WalRK two-component regulatory system regulator WalI -
  C2H91_RS10580 (C2H91_10590) vicX 2130217..2131011 (+) 795 WP_003226939.1 MBL fold metallo-hydrolase Regulator
  C2H91_RS10585 (C2H91_10595) htrA 2131093..2132295 (+) 1203 WP_103803371.1 serine protease HtrC Regulator
  C2H91_RS10590 - 2132315..2132441 (+) 127 Protein_2037 hypothetical protein -
  C2H91_RS10595 (C2H91_10605) - 2132558..2132746 (+) 189 Protein_2038 ATP-binding protein -
  C2H91_RS10600 (C2H91_10610) rocR 2132728..2134113 (-) 1386 WP_003244510.1 arginine utilization regulatory protein RocR -
  C2H91_RS10605 (C2H91_10615) rocD 2134351..2135556 (+) 1206 WP_108029261.1 ornithine aminotransferase -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29283.28 Da        Isoelectric Point: 5.8036

>NTDB_id=222068 C2H91_RS10580 WP_003226939.1 2130217..2131011(+) (vicX) [Bacillus subtilis strain PK3_9]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=222068 C2H91_RS10580 WP_003226939.1 2130217..2131011(+) (vicX) [Bacillus subtilis strain PK3_9]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCGATGGAGAC
AGTGAAGTCGTTTGGCGGACTTGATGTTGAATCGTTTGGCGTCTCCCACGATGCGGCGGAACCGATGTTTTATGTGTTCC
ATTATAACGGCCGAAAGCTCGCATTAATGACAGATACGGGATATGTCAGCGACCGAATGAAAGGCATTATCCGTTCAGCG
AATGTGTTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGGAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTACAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACCGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53