Detailed information NTG0221977

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: C2H83_RS21335
• Genome accession: NZ_CP026028
• Coordinates: 4121452..4122477 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain CIT
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4116452..4127477

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C2H83_RS21305	zapB	4116536..4116781 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
C2H83_RS21310	rraA	4116866..4117351 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
C2H83_RS21315	menA	4117444..4118370 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
C2H83_RS21320	hslU	4118437..4119768 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
C2H83_RS21325	hslV	4119778..4120308 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
C2H83_RS21330	ftsN	4120401..4121360 (-)	960	WP_000068828.1	cell division protein FtsN	-
C2H83_RS21335	cytR	4121452..4122477 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
C2H83_RS21340	priA	4122633..4124831 (-)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
C2H83_RS21345	rpmE	4125034..4125246 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
C2H83_RS21350	yiiX	4125307..4125915 (-)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
C2H83_RS21355	metJ	4126099..4126416 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=221977 C2H83_RS21335 WP_000644904.1 4121452..4122477(-) (cytR) [Escherichia coli strain CIT]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=221977 C2H83_RS21335 WP_000644904.1 4121452..4122477(-) (cytR) [Escherichia coli strain CIT]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628