Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | BSK2_RS12425 | Genome accession | NZ_CP020367 |
| Coordinates | 2435945..2437015 (-) | Length | 356 a.a. |
| NCBI ID | WP_004399124.1 | Uniprot ID | A0A809FNW6 |
| Organism | Bacillus subtilis strain GQJK2 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2430945..2442015
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BSK2_RS12380 (BSK2_12380) | tapA | 2431424..2432185 (-) | 762 | WP_029726724.1 | amyloid fiber anchoring/assembly protein TapA | - |
| BSK2_RS12385 (BSK2_12385) | yqzG | 2432457..2432783 (+) | 327 | WP_029317915.1 | YqzG/YhdC family protein | - |
| BSK2_RS12390 (BSK2_12390) | spoIITA | 2432825..2433004 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| BSK2_RS12395 (BSK2_12395) | comGG | 2433075..2433449 (-) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| BSK2_RS12400 (BSK2_12400) | comGF | 2433450..2433833 (-) | 384 | WP_080529536.1 | ComG operon protein ComGF | Machinery gene |
| BSK2_RS12405 (BSK2_12405) | comGE | 2433859..2434206 (-) | 348 | WP_080529537.1 | ComG operon protein 5 | Machinery gene |
| BSK2_RS12410 (BSK2_12410) | comGD | 2434190..2434621 (-) | 432 | WP_080529538.1 | comG operon protein ComGD | Machinery gene |
| BSK2_RS12415 (BSK2_12415) | comGC | 2434611..2434907 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| BSK2_RS12420 (BSK2_12420) | comGB | 2434921..2435958 (-) | 1038 | WP_080529539.1 | comG operon protein ComGB | Machinery gene |
| BSK2_RS12425 (BSK2_12425) | comGA | 2435945..2437015 (-) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| BSK2_RS12430 (BSK2_12430) | - | 2437228..2437425 (-) | 198 | WP_080529540.1 | hypothetical protein | - |
| BSK2_RS12435 (BSK2_12435) | corA | 2437427..2438380 (-) | 954 | WP_080529541.1 | magnesium transporter CorA | - |
| BSK2_RS12440 (BSK2_12440) | yqhB | 2438523..2439851 (+) | 1329 | WP_041850018.1 | hemolysin family protein | - |
| BSK2_RS12445 (BSK2_12445) | rsbRD | 2439904..2440740 (-) | 837 | WP_041850019.1 | RsbT co-antagonist protein RsbRD | - |
| BSK2_RS12455 (BSK2_12455) | mgsR | 2440964..2441344 (-) | 381 | WP_003230147.1 | transcriptional regulator MgsR | - |
| BSK2_RS12460 (BSK2_12460) | yqgY | 2441576..2441821 (+) | 246 | WP_003226300.1 | DUF2626 domain-containing protein | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 40458.64 Da Isoelectric Point: 9.0175
>NTDB_id=221765 BSK2_RS12425 WP_004399124.1 2435945..2437015(-) (comGA) [Bacillus subtilis strain GQJK2]
MDSIEKVSKNLIEEAYLTKASDIHIVPRERDAIIHFRVDHALLKKRDMKKEECVRLISHFKFLSAMDIGERRKPQNGSLT
LKLKEGNVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLVQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLACPFCENGCSSVYCRQSRNTRRASVYELLYGKNLQQCIQEAKGN
HANYQYQTLRQIIRKGIALGYLTTNNYDRWVYHEKD
MDSIEKVSKNLIEEAYLTKASDIHIVPRERDAIIHFRVDHALLKKRDMKKEECVRLISHFKFLSAMDIGERRKPQNGSLT
LKLKEGNVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLVQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLACPFCENGCSSVYCRQSRNTRRASVYELLYGKNLQQCIQEAKGN
HANYQYQTLRQIIRKGIALGYLTTNNYDRWVYHEKD
Nucleotide
Download Length: 1071 bp
>NTDB_id=221765 BSK2_RS12425 WP_004399124.1 2435945..2437015(-) (comGA) [Bacillus subtilis strain GQJK2]
TTGGATTCAATAGAAAAGGTAAGCAAAAACTTGATTGAAGAAGCATATCTAACAAAGGCTTCTGATATTCACATTGTGCC
GAGGGAGCGGGACGCTATCATTCATTTTCGGGTCGATCATGCCTTGCTGAAAAAAAGGGACATGAAAAAAGAAGAGTGCG
TAAGGCTGATTTCACATTTTAAATTTCTTTCAGCAATGGATATAGGTGAAAGGCGAAAGCCGCAAAACGGTTCGCTTACG
TTAAAGCTGAAAGAGGGAAATGTTCATTTAAGAATGTCAACGCTGCCCACAATTAATGAAGAAAGCCTCGTGATCAGAGT
GATGCCCCAATACAATATCCCTTCGATTGATAAATTGTCGCTATTTCCGAAGACAGGAGCCACATTACTCTCGTTTTTAA
AACATTCCCATGGCATGCTCATTTTTACCGGGCCAACTGGTTCAGGGAAGACTACCACACTATACTCTCTCGTTCAATAT
GCAAAAAAACACTTTAATCGAAATATTGTCACATTAGAGGACCCTGTTGAAACAAGGGACGAAGATGTTCTTCAGGTTCA
GGTGAATGAAAAAGCCGGTGTAACTTATTCCGCAGGTCTGAAAGCAATTTTGCGCCATGACCCCGATATGATTATTTTAG
GTGAGATCAGAGACGCGGAAACAGCTGAAATTGCGGTGCGGGCAGCGATGACGGGACATCTGGTACTAACGAGCCTTCAT
ACGAGAGACGCAAAGGGCGCAATTTACAGACTGCTTGAATTCGGTATCAATATGAATGAAATCGAACAGACTGTCATTGC
AATAGCGGCTCAGCGCTTGGTTGATTTGGCTTGCCCGTTTTGTGAAAACGGATGTTCATCAGTGTATTGCCGACAGTCAC
GAAATACCAGGAGAGCTAGCGTTTATGAGCTTCTATACGGGAAAAATCTTCAGCAATGTATCCAGGAGGCAAAAGGAAAT
CATGCAAATTACCAATATCAAACGCTTCGTCAAATTATCAGAAAAGGAATTGCGCTCGGCTATTTAACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAAAAGATTAG
TTGGATTCAATAGAAAAGGTAAGCAAAAACTTGATTGAAGAAGCATATCTAACAAAGGCTTCTGATATTCACATTGTGCC
GAGGGAGCGGGACGCTATCATTCATTTTCGGGTCGATCATGCCTTGCTGAAAAAAAGGGACATGAAAAAAGAAGAGTGCG
TAAGGCTGATTTCACATTTTAAATTTCTTTCAGCAATGGATATAGGTGAAAGGCGAAAGCCGCAAAACGGTTCGCTTACG
TTAAAGCTGAAAGAGGGAAATGTTCATTTAAGAATGTCAACGCTGCCCACAATTAATGAAGAAAGCCTCGTGATCAGAGT
GATGCCCCAATACAATATCCCTTCGATTGATAAATTGTCGCTATTTCCGAAGACAGGAGCCACATTACTCTCGTTTTTAA
AACATTCCCATGGCATGCTCATTTTTACCGGGCCAACTGGTTCAGGGAAGACTACCACACTATACTCTCTCGTTCAATAT
GCAAAAAAACACTTTAATCGAAATATTGTCACATTAGAGGACCCTGTTGAAACAAGGGACGAAGATGTTCTTCAGGTTCA
GGTGAATGAAAAAGCCGGTGTAACTTATTCCGCAGGTCTGAAAGCAATTTTGCGCCATGACCCCGATATGATTATTTTAG
GTGAGATCAGAGACGCGGAAACAGCTGAAATTGCGGTGCGGGCAGCGATGACGGGACATCTGGTACTAACGAGCCTTCAT
ACGAGAGACGCAAAGGGCGCAATTTACAGACTGCTTGAATTCGGTATCAATATGAATGAAATCGAACAGACTGTCATTGC
AATAGCGGCTCAGCGCTTGGTTGATTTGGCTTGCCCGTTTTGTGAAAACGGATGTTCATCAGTGTATTGCCGACAGTCAC
GAAATACCAGGAGAGCTAGCGTTTATGAGCTTCTATACGGGAAAAATCTTCAGCAATGTATCCAGGAGGCAAAAGGAAAT
CATGCAAATTACCAATATCAAACGCTTCGTCAAATTATCAGAAAAGGAATTGCGCTCGGCTATTTAACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAAAAGATTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |