Detailed information
Bioinformatically predicted
Overview
| Name | degS | Type | Regulator |
| Locus tag | BLMD_RS18955 | Genome accession | NZ_CP020352 |
| Coordinates | 3749945..3751102 (-) | Length | 385 a.a. |
| NCBI ID | WP_020453119.1 | Uniprot ID | A0A6I7TVP7 |
| Organism | Bacillus paralicheniformis strain MDJK30 | ||
| Function | phosphorylation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3744945..3756102
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BLMD_RS18925 (BLMD_18925) | - | 3745183..3745602 (-) | 420 | WP_020453114.1 | TIGR03826 family flagellar region protein | - |
| BLMD_RS18930 (BLMD_18930) | comFC | 3745661..3746398 (-) | 738 | WP_026580174.1 | ComF family protein | Machinery gene |
| BLMD_RS18935 (BLMD_18935) | - | 3746355..3746639 (-) | 285 | WP_020453116.1 | late competence development ComFB family protein | - |
| BLMD_RS18940 (BLMD_18940) | comFA | 3746694..3748088 (-) | 1395 | WP_020453117.1 | DEAD/DEAH box helicase | Machinery gene |
| BLMD_RS18945 (BLMD_18945) | - | 3748212..3749054 (-) | 843 | WP_020453118.1 | DegV family protein | - |
| BLMD_RS18950 (BLMD_18950) | degU | 3749174..3749863 (-) | 690 | WP_003185730.1 | two-component system response regulator DegU | Regulator |
| BLMD_RS18955 (BLMD_18955) | degS | 3749945..3751102 (-) | 1158 | WP_020453119.1 | sensor histidine kinase | Regulator |
| BLMD_RS18960 (BLMD_18960) | - | 3751325..3751963 (+) | 639 | WP_023856394.1 | YigZ family protein | - |
| BLMD_RS18965 (BLMD_18965) | - | 3751978..3753057 (+) | 1080 | WP_020453121.1 | LCP family protein | - |
| BLMD_RS18970 (BLMD_18970) | - | 3753110..3753493 (-) | 384 | WP_020453122.1 | hypothetical protein | - |
| BLMD_RS18975 (BLMD_18975) | - | 3753602..3754666 (-) | 1065 | WP_020453123.1 | glycosyltransferase family 4 protein | - |
| BLMD_RS18980 (BLMD_18980) | tuaH | 3754797..3755984 (-) | 1188 | WP_229029879.1 | teichuronic acid biosynthesis protein TuaH | - |
Sequence
Protein
Download Length: 385 a.a. Molecular weight: 44650.34 Da Isoelectric Point: 6.7862
>NTDB_id=221665 BLMD_RS18955 WP_020453119.1 3749945..3751102(-) (degS) [Bacillus paralicheniformis strain MDJK30]
MSVSKMDSKVLDSIIMKMLKTVDGSKDEVFQIGEQSRQQYEGLVEELKQIKQQVNEVIDLGDRLEVHARHARNRLSEVSR
NFHKFSEEEIREAYEKAHKLQVELTMIQQREKQLREKRDDLERRLLGLQEIIERSEGLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDKGTEEGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEDYHGKAKIHFQCIGESEDRRIAPRFEVALFRLAQEAVTNALKHSESTEIHVKVEV
TKDFVTLIIKDNGNGFDLKEVKGKKNKSFGLLGMKERVDLLEGSMTIDSKIGLGTFILIKVPLSL
MSVSKMDSKVLDSIIMKMLKTVDGSKDEVFQIGEQSRQQYEGLVEELKQIKQQVNEVIDLGDRLEVHARHARNRLSEVSR
NFHKFSEEEIREAYEKAHKLQVELTMIQQREKQLREKRDDLERRLLGLQEIIERSEGLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDKGTEEGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEDYHGKAKIHFQCIGESEDRRIAPRFEVALFRLAQEAVTNALKHSESTEIHVKVEV
TKDFVTLIIKDNGNGFDLKEVKGKKNKSFGLLGMKERVDLLEGSMTIDSKIGLGTFILIKVPLSL
Nucleotide
Download Length: 1158 bp
>NTDB_id=221665 BLMD_RS18955 WP_020453119.1 3749945..3751102(-) (degS) [Bacillus paralicheniformis strain MDJK30]
GTGAGTGTTTCCAAAATGGACTCCAAAGTTTTAGATTCAATCATTATGAAGATGTTAAAAACGGTTGATGGGAGCAAGGA
TGAGGTCTTTCAAATCGGAGAGCAGTCCCGTCAGCAATATGAAGGCTTGGTAGAAGAGCTGAAGCAGATTAAACAGCAGG
TCAACGAAGTCATCGATCTTGGAGACAGGCTGGAAGTGCATGCCCGCCATGCGCGAAACCGCTTGTCTGAGGTCAGCAGA
AACTTTCATAAATTCAGTGAAGAAGAGATTCGCGAAGCTTATGAAAAAGCCCACAAACTGCAGGTTGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGAGAGAGAAGCGTGATGATCTGGAACGGCGCCTTTTGGGGCTTCAGGAAATCATCGAGC
GTTCAGAAGGGCTTGTCAGCCAGATTACCGTCGTCTTAAACTATTTAAATCAGGATCTGCGCCAGGTTGGCGTTCTCCTA
GAAGATGCGCAGGCCAAACAGGATTTCGGACTGCGGATCATCGAAGCCCAAGAGGAAGAAAGAAAAAGGGTCTCAAGGGA
AATCCACGACGGCCCTGCGCAAATGCTGGCCAACGTCATGATGAGATCTGAGCTGATCGAACGCATCTTCAGAGACAAAG
GAACAGAAGAAGGCTTTCAGGAAATTAGAAACCTCCGGCAAAACGTCAGAAATGCTCTTTATGAAGTCAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGATTGATACCGACGCTCAGAAAATACTTGAACACGATCGAAGATTA
TCATGGAAAAGCAAAGATCCATTTCCAATGCATCGGAGAATCCGAAGATAGAAGAATAGCACCGCGGTTTGAGGTTGCAC
TTTTCCGGCTTGCACAGGAAGCAGTGACAAACGCCTTAAAACACTCCGAATCAACTGAGATTCATGTTAAAGTAGAAGTG
ACAAAAGATTTTGTGACGTTGATTATCAAAGACAATGGAAACGGCTTTGACTTAAAAGAAGTTAAAGGCAAGAAGAACAA
ATCTTTCGGTCTGCTAGGTATGAAAGAAAGAGTCGATTTGCTCGAAGGTTCAATGACAATCGATTCGAAAATAGGTCTTG
GGACATTTATTTTGATTAAAGTTCCGCTGTCTTTGTAA
GTGAGTGTTTCCAAAATGGACTCCAAAGTTTTAGATTCAATCATTATGAAGATGTTAAAAACGGTTGATGGGAGCAAGGA
TGAGGTCTTTCAAATCGGAGAGCAGTCCCGTCAGCAATATGAAGGCTTGGTAGAAGAGCTGAAGCAGATTAAACAGCAGG
TCAACGAAGTCATCGATCTTGGAGACAGGCTGGAAGTGCATGCCCGCCATGCGCGAAACCGCTTGTCTGAGGTCAGCAGA
AACTTTCATAAATTCAGTGAAGAAGAGATTCGCGAAGCTTATGAAAAAGCCCACAAACTGCAGGTTGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGAGAGAGAAGCGTGATGATCTGGAACGGCGCCTTTTGGGGCTTCAGGAAATCATCGAGC
GTTCAGAAGGGCTTGTCAGCCAGATTACCGTCGTCTTAAACTATTTAAATCAGGATCTGCGCCAGGTTGGCGTTCTCCTA
GAAGATGCGCAGGCCAAACAGGATTTCGGACTGCGGATCATCGAAGCCCAAGAGGAAGAAAGAAAAAGGGTCTCAAGGGA
AATCCACGACGGCCCTGCGCAAATGCTGGCCAACGTCATGATGAGATCTGAGCTGATCGAACGCATCTTCAGAGACAAAG
GAACAGAAGAAGGCTTTCAGGAAATTAGAAACCTCCGGCAAAACGTCAGAAATGCTCTTTATGAAGTCAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGATTGATACCGACGCTCAGAAAATACTTGAACACGATCGAAGATTA
TCATGGAAAAGCAAAGATCCATTTCCAATGCATCGGAGAATCCGAAGATAGAAGAATAGCACCGCGGTTTGAGGTTGCAC
TTTTCCGGCTTGCACAGGAAGCAGTGACAAACGCCTTAAAACACTCCGAATCAACTGAGATTCATGTTAAAGTAGAAGTG
ACAAAAGATTTTGTGACGTTGATTATCAAAGACAATGGAAACGGCTTTGACTTAAAAGAAGTTAAAGGCAAGAAGAACAA
ATCTTTCGGTCTGCTAGGTATGAAAGAAAGAGTCGATTTGCTCGAAGGTTCAATGACAATCGATTCGAAAATAGGTCTTG
GGACATTTATTTTGATTAAAGTTCCGCTGTCTTTGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| degS | Bacillus subtilis subsp. subtilis str. 168 |
89.351 |
100 |
0.894 |