Detailed information
Bioinformatically predicted
Overview
| Name | pilF/pilF2 | Type | Machinery gene |
| Locus tag | BTV67_RS07455 | Genome accession | NZ_CP020345 |
| Coordinates | 1557787..1558332 (+) | Length | 181 a.a. |
| NCBI ID | WP_010907447.1 | Uniprot ID | - |
| Organism | Pasteurella multocida subsp. multocida strain CIRMBP-0884 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1552787..1563332
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BTV67_RS07445 (BTV67_07445) | - | 1554018..1556384 (+) | 2367 | WP_010907445.1 | tetratricopeptide repeat protein | - |
| BTV67_RS07450 (BTV67_07450) | - | 1556564..1557748 (+) | 1185 | WP_010907446.1 | bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN | - |
| BTV67_RS07455 (BTV67_07455) | pilF/pilF2 | 1557787..1558332 (+) | 546 | WP_010907447.1 | type IV pilus biogenesis/stability protein PilW | Machinery gene |
| BTV67_RS07460 (BTV67_07460) | - | 1558455..1559411 (+) | 957 | WP_005725132.1 | helix-turn-helix domain-containing protein | - |
| BTV67_RS07465 (BTV67_07465) | ispG | 1559438..1560541 (+) | 1104 | WP_005719572.1 | flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | - |
| BTV67_RS07470 (BTV67_07470) | hisS | 1560571..1561842 (+) | 1272 | WP_010907448.1 | histidine--tRNA ligase | - |
| BTV67_RS07475 (BTV67_07475) | - | 1561861..1562472 (+) | 612 | WP_005725137.1 | YfgM family protein | - |
| BTV67_RS07480 (BTV67_07480) | - | 1562677..1563114 (+) | 438 | WP_010907449.1 | methyltransferase family protein | - |
Sequence
Protein
Download Length: 181 a.a. Molecular weight: 20911.47 Da Isoelectric Point: 7.8913
>NTDB_id=221523 BTV67_RS07455 WP_010907447.1 1557787..1558332(+) (pilF/pilF2) [Pasteurella multocida subsp. multocida strain CIRMBP-0884]
MTRVFQVWIASIFSLFLSACVSQEGNKTFDSHEAAKARIELGLGYLSQHDFARAKQNFDKALSHAPNYYLSHAVLAYLYQ
KQGHLDLARHAYEKAIKLDKNQGDVLNNYGAFLCQQGEFEQAYKQFSQALNAPHYYQHADTYENLVWCASFAKDTVRYQQ
NLQHLTQFDPNRAKKFPPHIE
MTRVFQVWIASIFSLFLSACVSQEGNKTFDSHEAAKARIELGLGYLSQHDFARAKQNFDKALSHAPNYYLSHAVLAYLYQ
KQGHLDLARHAYEKAIKLDKNQGDVLNNYGAFLCQQGEFEQAYKQFSQALNAPHYYQHADTYENLVWCASFAKDTVRYQQ
NLQHLTQFDPNRAKKFPPHIE
Nucleotide
Download Length: 546 bp
>NTDB_id=221523 BTV67_RS07455 WP_010907447.1 1557787..1558332(+) (pilF/pilF2) [Pasteurella multocida subsp. multocida strain CIRMBP-0884]
ATGACGCGCGTTTTTCAAGTATGGATAGCAAGCATTTTTTCTCTTTTTCTTTCTGCCTGTGTGAGTCAAGAAGGTAACAA
AACGTTTGATTCACATGAGGCAGCAAAAGCCAGAATTGAATTAGGTTTAGGCTATTTATCTCAGCATGATTTTGCGCGAG
CAAAGCAAAATTTTGATAAAGCTTTATCCCATGCCCCAAATTACTATTTATCTCATGCGGTCTTAGCGTATCTCTACCAA
AAACAAGGTCATCTTGATTTAGCCCGTCACGCTTATGAAAAGGCGATAAAATTAGATAAAAATCAAGGCGATGTATTAAA
TAATTATGGTGCCTTTTTATGCCAACAAGGTGAGTTTGAACAAGCTTACAAACAATTTTCTCAAGCATTAAATGCCCCAC
ATTATTATCAACACGCCGATACTTATGAAAATTTAGTTTGGTGTGCGTCTTTTGCCAAAGACACTGTCCGTTATCAACAA
AATTTGCAACATTTAACGCAGTTTGATCCCAATAGAGCAAAAAAATTTCCGCCACATATTGAGTAA
ATGACGCGCGTTTTTCAAGTATGGATAGCAAGCATTTTTTCTCTTTTTCTTTCTGCCTGTGTGAGTCAAGAAGGTAACAA
AACGTTTGATTCACATGAGGCAGCAAAAGCCAGAATTGAATTAGGTTTAGGCTATTTATCTCAGCATGATTTTGCGCGAG
CAAAGCAAAATTTTGATAAAGCTTTATCCCATGCCCCAAATTACTATTTATCTCATGCGGTCTTAGCGTATCTCTACCAA
AAACAAGGTCATCTTGATTTAGCCCGTCACGCTTATGAAAAGGCGATAAAATTAGATAAAAATCAAGGCGATGTATTAAA
TAATTATGGTGCCTTTTTATGCCAACAAGGTGAGTTTGAACAAGCTTACAAACAATTTTCTCAAGCATTAAATGCCCCAC
ATTATTATCAACACGCCGATACTTATGAAAATTTAGTTTGGTGTGCGTCTTTTGCCAAAGACACTGTCCGTTATCAACAA
AATTTGCAACATTTAACGCAGTTTGATCCCAATAGAGCAAAAAAATTTCCGCCACATATTGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilF/pilF2 | Haemophilus influenzae Rd KW20 |
50 |
97.238 |
0.486 |
| pilF | Glaesserella parasuis strain SC1401 |
43.85 |
100 |
0.453 |