Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   B2J85_RS02555 Genome accession   NZ_CP020017
Coordinates   516396..517661 (+) Length   421 a.a.
NCBI ID   WP_094243351.1    Uniprot ID   -
Organism   Tetragenococcus halophilus strain KUD23     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 511396..522661
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B2J85_RS02530 tsf 511833..512714 (+) 882 WP_014125335.1 translation elongation factor Ts -
  B2J85_RS02535 pyrH 512929..513648 (+) 720 WP_041591846.1 UMP kinase -
  B2J85_RS02540 frr 513652..514209 (+) 558 WP_014125333.1 ribosome recycling factor -
  B2J85_RS02545 - 514641..515441 (+) 801 WP_014125332.1 isoprenyl transferase -
  B2J85_RS02550 - 515438..516244 (+) 807 WP_014125331.1 phosphatidate cytidylyltransferase -
  B2J85_RS02555 eeP 516396..517661 (+) 1266 WP_094243351.1 RIP metalloprotease RseP Regulator
  B2J85_RS02560 - 517746..519452 (+) 1707 WP_094243352.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 421 a.a.        Molecular weight: 46203.98 Da        Isoelectric Point: 4.1638

>NTDB_id=220125 B2J85_RS02555 WP_094243351.1 516396..517661(+) (eeP) [Tetragenococcus halophilus strain KUD23]
MKTLITFLIVFSVVVVIHEFGHFYFAKKSGILVREFSIGMGPKLFSHQAKDGTTYTIRAIPMGGYVRMAGYEDEEELKAG
MPVSLEVNENNEVIKINTSSKVQLENAIPLEVTRYDLTEALEITGFVNGNEDNVASYSVNHEAMIIEEDGTQLRIAPRDV
QFQSAKLWQRMLTNFAGPMNNFLLTIVLFIAIVFLQGGVPNEDSTVLGEVDPNGAAATAGLRSGDEIVAIDQEEVSSWPE
LQQTIQQQPDEELSLEVNRDDQTFSVDATPESVESGNQEIGQLGVQASLKTGFWDKVVGGVKESWDMLVQILAALRNLVT
NFSLDQLGGPVAIFQMSDQAAQQGAMTVLLLTAMISVNLGIVNLLPIPGLDGGKLLLNIVEAIRGKPISEEKEGMITLVG
FGLLMLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1266 bp        

>NTDB_id=220125 B2J85_RS02555 WP_094243351.1 516396..517661(+) (eeP) [Tetragenococcus halophilus strain KUD23]
ATGAAGACATTGATTACATTTTTAATCGTCTTTTCAGTAGTTGTGGTAATACATGAATTTGGACATTTTTATTTTGCTAA
GAAATCGGGCATTTTAGTCCGTGAATTTTCTATCGGCATGGGTCCTAAGCTATTCAGCCACCAAGCTAAAGACGGTACGA
CTTACACCATACGAGCCATACCGATGGGTGGTTATGTTCGGATGGCAGGCTATGAGGATGAAGAAGAACTAAAAGCTGGA
ATGCCGGTATCTTTGGAAGTAAATGAGAATAACGAAGTCATTAAAATCAATACAAGTTCAAAAGTACAGTTAGAAAATGC
GATCCCTTTAGAAGTGACTCGTTATGATTTGACTGAGGCGCTTGAAATTACAGGATTTGTTAATGGAAATGAAGATAATG
TAGCAAGCTATTCAGTAAATCATGAGGCAATGATTATTGAAGAAGACGGTACGCAGCTGCGTATCGCACCTAGAGATGTA
CAGTTTCAGTCTGCTAAGTTATGGCAAAGAATGTTGACAAATTTCGCGGGACCTATGAATAATTTCTTATTAACGATTGT
GTTATTCATTGCCATTGTATTTTTACAAGGCGGAGTTCCTAATGAAGACTCAACAGTACTAGGTGAAGTAGATCCAAATG
GTGCAGCAGCAACAGCCGGTTTAAGGTCGGGGGATGAAATTGTAGCGATCGACCAAGAAGAAGTATCAAGTTGGCCTGAA
CTGCAACAAACGATTCAACAACAACCTGATGAAGAGTTATCGCTTGAAGTTAACCGGGATGACCAAACTTTTTCTGTAGA
TGCAACGCCTGAAAGCGTAGAATCGGGTAATCAAGAGATTGGGCAATTGGGCGTACAAGCATCGCTTAAAACTGGTTTTT
GGGACAAAGTAGTCGGCGGTGTGAAAGAAAGTTGGGACATGCTTGTCCAAATTTTAGCTGCCTTAAGAAACTTGGTAACT
AATTTTAGTTTGGATCAATTAGGCGGTCCAGTTGCTATTTTCCAAATGTCTGATCAAGCTGCTCAACAAGGCGCTATGAC
AGTCTTACTTTTGACCGCTATGATATCAGTCAATTTAGGTATCGTGAACTTACTACCCATTCCTGGTTTGGACGGTGGAA
AATTATTACTTAATATAGTCGAAGCTATACGTGGAAAACCAATTAGTGAAGAAAAAGAAGGGATGATTACCTTAGTAGGT
TTTGGTTTGTTGATGTTATTAATGGTATTAGTCACTTGGAATGATATCCAGCGCTTTTTCTTTTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_6)

(209-259)

Peptidase family M50 (Peptidase_M50)

(6-407)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

51.402

100

0.523
  eeP Streptococcus thermophilus LMD-9

51.402

100

0.523

Multiple sequence alignment