Detailed information
Bioinformatically predicted
Overview
| Name | comB | Type | Machinery gene |
| Locus tag | BV121_RS02610 | Genome accession | NZ_CP020008 |
| Coordinates | 509698..510204 (-) | Length | 168 a.a. |
| NCBI ID | WP_011272049.1 | Uniprot ID | Q4QNA7 |
| Organism | Haemophilus influenzae strain 5P28H1 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 504698..515204
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BV121_RS02580 (BV121_524) | nudC | 505191..505985 (-) | 795 | WP_005686893.1 | NAD(+) diphosphatase | - |
| BV121_RS02585 (BV121_525) | nfuA | 506052..506648 (-) | 597 | WP_005649300.1 | Fe-S biogenesis protein NfuA | - |
| BV121_RS02590 (BV121_526) | - | 506724..507410 (-) | 687 | WP_011272045.1 | ComF family protein | - |
| BV121_RS02595 (BV121_527) | comE | 507423..508760 (-) | 1338 | WP_011272046.1 | type IV pilus secretin PilQ | Machinery gene |
| BV121_RS02600 (BV121_528) | comD | 508770..509183 (-) | 414 | WP_011272047.1 | pilus assembly protein PilP | Machinery gene |
| BV121_RS02605 (BV121_529) | comC | 509180..509701 (-) | 522 | WP_011272048.1 | competence protein ComC | Machinery gene |
| BV121_RS02610 (BV121_530) | comB | 509698..510204 (-) | 507 | WP_011272049.1 | competence protein ComB | Machinery gene |
| BV121_RS02615 (BV121_531) | comA | 510205..511002 (-) | 798 | WP_011272050.1 | pilus assembly protein PilM | Machinery gene |
| BV121_RS02620 (BV121_532) | - | 511101..513695 (+) | 2595 | WP_042593320.1 | penicillin-binding protein 1A | - |
| BV121_RS02625 (BV121_533) | - | 513768..514613 (+) | 846 | WP_105182564.1 | 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ | - |
| BV121_RS02630 (BV121_535) | - | 514782..515111 (+) | 330 | WP_005629464.1 | YbaB/EbfC family nucleoid-associated protein | - |
Sequence
Protein
Download Length: 168 a.a. Molecular weight: 19697.54 Da Isoelectric Point: 7.4684
>NTDB_id=219835 BV121_RS02610 WP_011272049.1 509698..510204(-) (comB) [Haemophilus influenzae strain 5P28H1]
MSMNLLPWRTYQHQKRLRRLAFYIALFILLAINLMLAFSNLIEQQKQNLQAQQTSFEQLNQQLHKTTMQIDQLRSAVKVG
EVLTSIPNEQVKKSLQQLSELPFQQGELNKFKQDANNLSLEGNAQDQTEFELIHQFLKKHFPNVKLSQVQPEQDTLFFHF
DVEQGAEK
MSMNLLPWRTYQHQKRLRRLAFYIALFILLAINLMLAFSNLIEQQKQNLQAQQTSFEQLNQQLHKTTMQIDQLRSAVKVG
EVLTSIPNEQVKKSLQQLSELPFQQGELNKFKQDANNLSLEGNAQDQTEFELIHQFLKKHFPNVKLSQVQPEQDTLFFHF
DVEQGAEK
Nucleotide
Download Length: 507 bp
>NTDB_id=219835 BV121_RS02610 WP_011272049.1 509698..510204(-) (comB) [Haemophilus influenzae strain 5P28H1]
ATGTCGATGAATTTATTGCCTTGGCGTACTTATCAACATCAAAAGCGTTTACGTCGTTTAGCTTTTTATATCGCTTTATT
TATCTTGCTTGCTATTAATTTAATGTTGGCTTTTAGCAATTTGATTGAACAACAGAAACAAAATTTGCAAGCGCAGCAAA
CATCTTTTGAACAACTTAATCAGCAACTTCACAAAACTACCATGCAAATTGATCAGTTACGCAGTGCGGTGAAAGTTGGT
GAAGTTTTGACATCTATTCCCAACGAGCAAGTAAAAAAGAGTTTACAACAGCTAAGTGAATTACCTTTTCAACAAGGAGA
ACTGAATAAATTTAAACAAGATGCCAATAACTTAAGTTTGGAAGGTAACGCGCAAGATCAAACAGAATTTGAACTGATTC
ATCAATTTTTAAAGAAACATTTTCCCAATGTGAAATTAAGTCAGGTTCAACCTGAACAAGATACATTGTTTTTTCACTTT
GATGTGGAACAAGGGGCGGAAAAATGA
ATGTCGATGAATTTATTGCCTTGGCGTACTTATCAACATCAAAAGCGTTTACGTCGTTTAGCTTTTTATATCGCTTTATT
TATCTTGCTTGCTATTAATTTAATGTTGGCTTTTAGCAATTTGATTGAACAACAGAAACAAAATTTGCAAGCGCAGCAAA
CATCTTTTGAACAACTTAATCAGCAACTTCACAAAACTACCATGCAAATTGATCAGTTACGCAGTGCGGTGAAAGTTGGT
GAAGTTTTGACATCTATTCCCAACGAGCAAGTAAAAAAGAGTTTACAACAGCTAAGTGAATTACCTTTTCAACAAGGAGA
ACTGAATAAATTTAAACAAGATGCCAATAACTTAAGTTTGGAAGGTAACGCGCAAGATCAAACAGAATTTGAACTGATTC
ATCAATTTTTAAAGAAACATTTTCCCAATGTGAAATTAAGTCAGGTTCAACCTGAACAAGATACATTGTTTTTTCACTTT
GATGTGGAACAAGGGGCGGAAAAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comB | Haemophilus influenzae 86-028NP |
100 |
100 |
1 |
| comB | Haemophilus influenzae Rd KW20 |
98.81 |
100 |
0.988 |