Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   SPYM18_RS07470 Genome accession   NC_003485
Coordinates   1445959..1446684 (-) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes MGAS8232     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1440959..1451684
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPYM18_RS07435 (spyM18_1731) rnpM 1440993..1441289 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  SPYM18_RS07440 (spyM18_1732) nusA 1441305..1442462 (-) 1158 WP_002983485.1 transcription termination factor NusA -
  SPYM18_RS07445 (spyM18_1733) rimP 1442637..1443173 (-) 537 WP_002983483.1 ribosome maturation factor RimP -
  SPYM18_RS07455 (spyM18_1734) trmB 1443432..1444067 (-) 636 WP_011018101.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  SPYM18_RS07460 (spyM18_1735) ccrZ 1444067..1444858 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  SPYM18_RS07465 (spyM18_1736) - 1444922..1445956 (-) 1035 WP_002983381.1 ABC transporter permease -
  SPYM18_RS07470 (spyM18_1737) pptA 1445959..1446684 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  SPYM18_RS07475 (spyM18_1738) - 1446756..1447175 (+) 420 WP_002983376.1 HIT family protein -
  SPYM18_RS07480 (spyM18_1739) - 1447172..1447528 (+) 357 WP_011018102.1 hypothetical protein -
  SPYM18_RS07485 (spyM18_1741) brpA 1447639..1448922 (-) 1284 WP_002983372.1 biofilm formation/cell division transcriptional regulator BrpA -
  SPYM18_RS07490 (spyM18_1742) - 1448931..1449455 (-) 525 WP_002983369.1 GNAT family N-acetyltransferase -
  SPYM18_RS07495 (spyM18_1743) tsaE 1449430..1449891 (-) 462 WP_002983367.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  SPYM18_RS07500 (spyM18_1744) - 1450045..1451505 (-) 1461 WP_011018103.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=21950 SPYM18_RS07470 WP_002983379.1 1445959..1446684(-) (pptA) [Streptococcus pyogenes MGAS8232]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=21950 SPYM18_RS07470 WP_002983379.1 1445959..1446684(-) (pptA) [Streptococcus pyogenes MGAS8232]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment