Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   B2G84_RS02740 Genome accession   NZ_CP019979
Coordinates   472826..473899 (+) Length   357 a.a.
NCBI ID   WP_079218618.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain Sag158     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 467826..478899
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B2G84_RS02710 (B2G84_02710) - 468719..469783 (+) 1065 WP_000021304.1 MmcQ/YjbR family DNA-binding protein -
  B2G84_RS02715 (B2G84_02715) asnA 469897..470889 (+) 993 WP_000748011.1 aspartate--ammonia ligase -
  B2G84_RS02720 (B2G84_02720) - 470934..471383 (-) 450 WP_000592263.1 thiol reductase thioredoxin -
  B2G84_RS02725 (B2G84_02725) rsmD 471513..472052 (+) 540 WP_001266830.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  B2G84_RS02730 (B2G84_02730) - 472064..472354 (+) 291 WP_000384889.1 hypothetical protein -
  B2G84_RS02735 (B2G84_02735) coaD 472351..472836 (+) 486 WP_079218616.1 pantetheine-phosphate adenylyltransferase -
  B2G84_RS02740 (B2G84_02740) sepM 472826..473899 (+) 1074 WP_079218618.1 SepM family pheromone-processing serine protease Regulator
  B2G84_RS02745 (B2G84_02745) - 473974..475306 (+) 1333 Protein_443 bifunctional metallophosphatase/5'-nucleotidase -
  B2G84_RS02750 (B2G84_02750) - 475375..475953 (+) 579 WP_001224500.1 YutD family protein -
  B2G84_RS02755 (B2G84_02755) rlmN 476004..477110 (+) 1107 WP_001124990.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  B2G84_RS02760 (B2G84_02760) - 477110..477625 (+) 516 WP_000919802.1 VanZ family protein -

Sequence


Protein


Download         Length: 357 a.a.        Molecular weight: 39229.46 Da        Isoelectric Point: 10.4385

>NTDB_id=219453 B2G84_RS02740 WP_079218618.1 472826..473899(+) (sepM) [Streptococcus agalactiae strain Sag158]
MKNRDPKRKHKSLLGLLKWWIIGFAFLLLVLASLVVRLPYYLEMPGGAYDIRSVLKVNKKADKAKGSYNFVAVSVSQATP
AQVLYAWLTPFTELSSKEETTSGFSNDDYLRINQFYMETSQNESIYQALKLANKQVSLTYKGVYVLNLAKNSTFKDRLHL
ADTVTGVNGKSFKNSSQLIKYVAALHLGDKVKVQYTSQGKKKESVGKVIKLSNGKNGIGIGLTDHTEVLSDVPVDFNTEG
VGGPSAGLMFTLAIYDQLVKEDLRKGRKIAGTGTIEQNGHVGDIGGAGLKVVSAAKKGMDIFFVPNNPIDKNAKKGKTKV
QTNYQEAKAAAKRLGTKMKIVPVQNVQQAIDYLKKTK

Nucleotide


Download         Length: 1074 bp        

>NTDB_id=219453 B2G84_RS02740 WP_079218618.1 472826..473899(+) (sepM) [Streptococcus agalactiae strain Sag158]
GTGAAGAATAGAGATCCAAAAAGAAAACATAAAAGTTTACTAGGTCTGCTTAAATGGTGGATTATAGGTTTTGCTTTTTT
ATTGTTAGTATTAGCAAGCCTTGTAGTGAGACTACCTTATTATTTGGAAATGCCAGGTGGAGCTTATGATATCCGTTCGG
TATTGAAAGTGAATAAAAAGGCTGATAAAGCTAAGGGTTCGTACAATTTTGTAGCGGTATCTGTCAGTCAAGCAACGCCA
GCTCAGGTTCTTTATGCTTGGTTAACTCCTTTTACAGAATTATCTAGTAAAGAGGAGACAACAAGTGGCTTTAGTAATGA
CGATTATCTCAGAATTAATCAATTCTACATGGAGACTTCTCAAAATGAGTCCATCTATCAAGCTTTAAAGTTAGCTAATA
AGCAAGTATCTCTTACTTATAAAGGAGTTTATGTGCTTAACTTAGCTAAAAATTCGACATTTAAAGATAGATTACATTTA
GCTGATACAGTCACAGGAGTTAATGGCAAAAGTTTCAAAAATTCTTCTCAACTTATCAAATATGTTGCAGCTCTTCATCT
AGGTGATAAAGTAAAGGTACAATACACAAGTCAAGGTAAAAAGAAAGAATCAGTTGGTAAAGTTATTAAACTATCAAACG
GTAAAAATGGTATTGGTATCGGTTTGACAGACCATACAGAAGTATTATCTGATGTTCCTGTGGACTTTAATACTGAAGGT
GTTGGAGGACCAAGTGCAGGTTTAATGTTTACTTTAGCGATTTACGACCAATTGGTTAAAGAAGATTTACGTAAAGGACG
TAAGATTGCAGGTACTGGTACTATTGAGCAAAATGGGCATGTTGGCGATATTGGTGGAGCAGGTTTGAAAGTTGTTTCAG
CGGCTAAAAAAGGAATGGATATTTTCTTTGTTCCTAATAATCCGATCGATAAAAATGCTAAAAAAGGCAAAACAAAGGTT
CAGACGAATTATCAAGAGGCAAAAGCAGCAGCTAAGCGATTAGGTACGAAGATGAAAATTGTACCAGTTCAAAATGTTCA
GCAAGCTATTGATTATTTGAAAAAAACAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

69.027

94.958

0.655


Multiple sequence alignment