Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   B2D37_RS16535 Genome accession   NZ_CP019947
Coordinates   3651860..3652267 (-) Length   135 a.a.
NCBI ID   WP_079203716.1    Uniprot ID   A0A1I5M1L1
Organism   Pseudomonas sp. CC6-YY-74     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3646860..3657267
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B2D37_RS16515 - 3647810..3648667 (-) 858 WP_079203712.1 CheR family methyltransferase -
  B2D37_RS16520 - 3648736..3650784 (-) 2049 WP_079203713.1 methyl-accepting chemotaxis protein -
  B2D37_RS16525 - 3650869..3651405 (-) 537 WP_079203714.1 chemotaxis protein CheW -
  B2D37_RS16530 pilH 3651447..3651812 (-) 366 WP_079203715.1 twitching motility response regulator PilH -
  B2D37_RS16535 pilG 3651860..3652267 (-) 408 WP_079203716.1 twitching motility response regulator PilG Regulator
  B2D37_RS16540 gshB 3652508..3653479 (+) 972 WP_079203717.1 glutathione synthase -
  B2D37_RS16545 - 3653567..3654463 (+) 897 WP_079203718.1 energy transducer TonB -
  B2D37_RS16550 - 3654598..3655167 (+) 570 WP_079203719.1 YqgE/AlgH family protein -
  B2D37_RS16555 ruvX 3655167..3655604 (+) 438 WP_079203720.1 Holliday junction resolvase RuvX -
  B2D37_RS16560 pyrR 3655738..3656244 (+) 507 WP_079203721.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  B2D37_RS16565 - 3656255..3657265 (+) 1011 WP_079203722.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14839.21 Da        Isoelectric Point: 7.2440

>NTDB_id=219092 B2D37_RS16535 WP_079203716.1 3651860..3652267(-) (pilG) [Pseudomonas sp. CC6-YY-74]
MEQHSEGLRVMVIDDSKTIRRTAETLLKKVGCEVITAVDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPNFTPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=219092 B2D37_RS16535 WP_079203716.1 3651860..3652267(-) (pilG) [Pseudomonas sp. CC6-YY-74]
ATGGAACAGCATTCCGAGGGTTTGAGGGTGATGGTGATCGACGATTCGAAGACGATTCGTCGTACCGCGGAAACCCTGCT
AAAGAAAGTGGGTTGCGAGGTAATTACCGCAGTTGACGGCTTCGATGCTTTGGCAAAGATCGCCGACACCCATCCGAATA
TTATTTTTGTCGACATCATGATGCCGCGGCTCGATGGCTATCAGACCTGTGCCCTGATCAAGAACAACAGTGCTTTCAAG
TCCACCCCGGTGATCATGCTGTCGTCCAAGGACGGCTTGTTCGACAAGGCCAAGGGGCGCATCGTTGGCTCCGATCAATA
TCTGACCAAACCTTTCAGCAAGGAAGAGTTGCTCGGCGCGATCAAGGCCCATGTCCCTAATTTCACCCCGGTGGAACAGG
CATCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1I5M1L1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

41.27

93.333

0.385

Multiple sequence alignment