Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | B2G52_RS04340 | Genome accession | NZ_CP019894 |
| Coordinates | 772271..772816 (-) | Length | 181 a.a. |
| NCBI ID | WP_003710240.1 | Uniprot ID | A0A1V0DT34 |
| Organism | Neisseria lactamica strain Y92-1009 | ||
| Function | pseudopilus extrusion and retraction (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 767271..777816
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B2G52_RS04315 (B2G52_04315) | - | 768311..768823 (-) | 513 | WP_003714369.1 | shikimate kinase | - |
| B2G52_RS04335 (B2G52_04335) | pilQ | 770076..772253 (-) | 2178 | WP_078835885.1 | type IV pilus secretin PilQ | Machinery gene |
| B2G52_RS04340 (B2G52_04340) | pilP | 772271..772816 (-) | 546 | WP_003710240.1 | pilus assembly protein PilP | Machinery gene |
| B2G52_RS04345 (B2G52_04345) | - | 772834..773496 (-) | 663 | WP_078835886.1 | type 4a pilus biogenesis protein PilO | - |
| B2G52_RS04350 (B2G52_04350) | pilN | 773497..774096 (-) | 600 | WP_003710236.1 | PilN domain-containing protein | Machinery gene |
| B2G52_RS04355 (B2G52_04355) | pilM | 774099..775214 (-) | 1116 | WP_003710234.1 | type IV pilus biogenesis protein PilM | - |
| B2G52_RS04360 (B2G52_04360) | - | 775365..777761 (+) | 2397 | WP_013449449.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 181 a.a. Molecular weight: 19602.98 Da Isoelectric Point: 4.6583
>NTDB_id=218724 B2G52_RS04340 WP_003710240.1 772271..772816(-) (pilP) [Neisseria lactamica strain Y92-1009]
MKYYALFISLAALSACSQDSEDLNAWMAQTQQEAKAGIIPFQAPTLPVAPVYSPPQPTGPNAFDFHRMEAAKKGGNAPDT
KRIKEALEKFSLENIRYVGIVKSGQKVSGFVEADGYVYTVGIGNYLGQNYGKIQSITDDSIVLNELIEDGTGNWVSRRAE
LPLNASDKNTEQAAAPAAEQN
MKYYALFISLAALSACSQDSEDLNAWMAQTQQEAKAGIIPFQAPTLPVAPVYSPPQPTGPNAFDFHRMEAAKKGGNAPDT
KRIKEALEKFSLENIRYVGIVKSGQKVSGFVEADGYVYTVGIGNYLGQNYGKIQSITDDSIVLNELIEDGTGNWVSRRAE
LPLNASDKNTEQAAAPAAEQN
Nucleotide
Download Length: 546 bp
>NTDB_id=218724 B2G52_RS04340 WP_003710240.1 772271..772816(-) (pilP) [Neisseria lactamica strain Y92-1009]
ATGAAATATTACGCCTTATTCATCAGTCTTGCCGCCCTATCCGCCTGTTCCCAAGATTCTGAAGACCTGAACGCGTGGAT
GGCTCAGACACAGCAAGAAGCCAAAGCAGGAATCATACCTTTCCAGGCTCCTACCCTGCCGGTCGCGCCGGTATACAGCC
CCCCTCAGCCGACGGGGCCCAACGCTTTCGATTTCCACCGGATGGAAGCCGCCAAAAAAGGGGGTAACGCCCCCGATACC
AAGCGTATTAAAGAAGCGCTGGAGAAATTCAGCCTGGAAAACATACGCTATGTCGGCATTGTGAAGTCCGGTCAGAAAGT
ATCCGGCTTCGTTGAAGCCGACGGCTATGTCTACACGGTCGGCATCGGCAACTATTTGGGGCAAAATTACGGTAAAATCC
AAAGCATTACCGACGACAGCATCGTTTTGAACGAATTAATCGAAGACGGTACGGGCAACTGGGTTTCCCGCAGGGCGGAA
CTGCCTCTGAACGCTTCCGACAAAAACACCGAACAAGCGGCAGCACCCGCCGCAGAACAAAATTAA
ATGAAATATTACGCCTTATTCATCAGTCTTGCCGCCCTATCCGCCTGTTCCCAAGATTCTGAAGACCTGAACGCGTGGAT
GGCTCAGACACAGCAAGAAGCCAAAGCAGGAATCATACCTTTCCAGGCTCCTACCCTGCCGGTCGCGCCGGTATACAGCC
CCCCTCAGCCGACGGGGCCCAACGCTTTCGATTTCCACCGGATGGAAGCCGCCAAAAAAGGGGGTAACGCCCCCGATACC
AAGCGTATTAAAGAAGCGCTGGAGAAATTCAGCCTGGAAAACATACGCTATGTCGGCATTGTGAAGTCCGGTCAGAAAGT
ATCCGGCTTCGTTGAAGCCGACGGCTATGTCTACACGGTCGGCATCGGCAACTATTTGGGGCAAAATTACGGTAAAATCC
AAAGCATTACCGACGACAGCATCGTTTTGAACGAATTAATCGAAGACGGTACGGGCAACTGGGTTTCCCGCAGGGCGGAA
CTGCCTCTGAACGCTTCCGACAAAAACACCGAACAAGCGGCAGCACCCGCCGCAGAACAAAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Neisseria meningitidis MC58 |
85.635 |
100 |
0.856 |