Detailed information    

insolico Bioinformatically predicted

Overview

Name   sepM   Type   Regulator
Locus tag   CR922_RS01605 Genome accession   NZ_CP025400
Coordinates   299584..300660 (+) Length   358 a.a.
NCBI ID   WP_011226464.1    Uniprot ID   Q5M2Z4
Organism   Streptococcus thermophilus strain EPS     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context

Location: 294584..305660
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CR922_RS01575 - 295471..296217 (+) 747 WP_095559509.1 amino acid ABC transporter permease -
  CR922_RS01580 amiE 296217..296960 (+) 744 WP_101361231.1 amino acid ABC transporter ATP-binding protein Regulator
  CR922_RS01585 - 297175..297399 (+) 225 WP_011226468.1 DUF4059 family protein -
  CR922_RS01590 trxB 297432..298385 (+) 954 WP_255136104.1 thioredoxin-disulfide reductase -
  CR922_RS01595 rsmD 298476..299075 (+) 600 WP_011227500.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  CR922_RS01600 coaD 299109..299606 (+) 498 WP_011226465.1 pantetheine-phosphate adenylyltransferase -
  CR922_RS01605 sepM 299584..300660 (+) 1077 WP_011226464.1 SepM family pheromone-processing serine protease Regulator
  CR922_RS01610 - 300745..301689 (+) 945 WP_011226463.1 TIGR01212 family radical SAM protein -
  CR922_RS01615 - 301686..302234 (+) 549 WP_004197152.1 tRNA (mnm(5)s(2)U34)-methyltransferase -
  CR922_RS01620 - 302231..302473 (+) 243 WP_011227499.1 hypothetical protein -
  CR922_RS01625 - 302482..304548 (+) 2067 WP_101361232.1 cation:proton antiporter -

Sequence

Protein


Download         Length: 358 a.a.        Molecular weight: 39232.11 Da        Isoelectric Point: 9.4944

>NTDB_id=218550 CR922_RS01605 WP_011226464.1 299584..300660(+) (sepM) [Streptococcus thermophilus strain EPS]
MANKTKSKSLLEKMWRIKWWLLSIFTVLFLLFALFFPLNNYYVELPGGAFDTKEVLTVNKKADDSKGSYNFVAVAQTKAT
LALMLYTQFNDFAKLQTAEEATGNYSDEDFMRINQFYMETSQNQAVYQGLTLAGKEVSLEYMGVYVLQVADDSSFKGVLN
IADTVTAVNGKTFDNSTDMIKYVQGLKLGSKVKVTYMRDGKEKTATGKIIKIANGKNGIGIGLTDHTEIKSPENVKFKLD
GVGGPSAGLMFTLAIYDQVSGQDLKAGRKIAGTGTIEKDGAVGDIGGAYLKVKSAADSGADIFFVPNNLVTKEMKKADPD
AKTNYQEAKEAAEKLGTKMKIVPVKTAQEAIDYLKKTK

Nucleotide


Download         Length: 1077 bp        

>NTDB_id=218550 CR922_RS01605 WP_011226464.1 299584..300660(+) (sepM) [Streptococcus thermophilus strain EPS]
GTGGCAAACAAGACAAAATCTAAATCGCTATTAGAGAAAATGTGGCGTATTAAGTGGTGGTTATTAAGTATTTTTACGGT
ACTTTTCCTCCTTTTTGCCCTCTTTTTCCCGCTCAATAATTACTATGTGGAGCTTCCGGGTGGTGCTTTTGATACCAAGG
AAGTCTTGACAGTGAATAAGAAAGCTGATGATTCTAAGGGCTCCTATAATTTTGTGGCGGTGGCTCAAACCAAGGCGACT
TTGGCCTTGATGCTCTATACTCAGTTTAATGATTTTGCAAAGCTTCAAACGGCTGAAGAGGCAACTGGAAATTACTCTGA
TGAAGATTTCATGCGCATCAACCAATTTTACATGGAGACTTCTCAAAACCAAGCGGTTTATCAGGGCTTGACTCTGGCTG
GTAAGGAGGTTAGTTTGGAGTATATGGGTGTCTATGTGCTTCAGGTTGCTGATGATTCTAGCTTCAAGGGTGTCCTCAAT
ATTGCTGATACGGTGACGGCTGTTAATGGTAAGACCTTTGATAATTCTACTGACATGATTAAATACGTTCAAGGACTTAA
GCTGGGTTCAAAGGTCAAGGTCACTTATATGAGAGATGGCAAAGAAAAGACTGCTACTGGTAAGATTATTAAGATTGCCA
ATGGCAAAAATGGTATTGGTATCGGCCTAACGGACCATACTGAGATCAAGAGTCCTGAGAATGTTAAGTTTAAACTGGAT
GGTGTCGGTGGGCCAAGTGCTGGTCTTATGTTTACCTTGGCTATTTACGATCAGGTGTCTGGTCAAGACCTCAAGGCTGG
CCGCAAGATTGCTGGTACAGGAACTATTGAAAAAGATGGGGCTGTCGGTGATATCGGTGGGGCCTATCTCAAGGTGAAAT
CTGCGGCTGATAGTGGCGCAGACATTTTCTTCGTGCCAAATAATCTAGTAACTAAGGAAATGAAAAAGGCTGATCCGGAT
GCCAAGACTAATTATCAAGAGGCCAAGGAAGCTGCCGAGAAACTGGGGACCAAGATGAAAATCGTCCCTGTTAAAACAGC
TCAAGAAGCCATTGATTATTTGAAAAAGACTAAATGA

Domains

Predicted by InterProScan.

PDZ domain (PDZ_2)

(137-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5M2Z4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

62.757

95.251

0.598