Detailed information NTG0021836

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: PCC7120DELTA_RS07000
• Genome accession: NC_003272
• Coordinates: 1198932..1200038 (+)
• Length: 368 a.a.
• NCBI ID: WP_010995202.1
• Uniprot ID: -
• Organism: Nostoc sp. PCC 7120 = FACHB-418
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1193932..1205038

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PCC7120DELTA_RS06975 (all1023)	-	1194350..1194862 (-)	513	WP_010995197.1	TIGR02652 family protein	-
PCC7120DELTA_RS06980 (alr1024)	-	1195102..1195632 (+)	531	WP_044520801.1	gamma carbonic anhydrase family protein	-
PCC7120DELTA_RS06985 (asr1025)	-	1195853..1195978 (+)	126	WP_010995199.1	photosystem II protein Y	-
PCC7120DELTA_RS06990 (alr1026)	-	1196116..1197369 (+)	1254	WP_010995200.1	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	-
PCC7120DELTA_RS06995 (all1027)	-	1197400..1198698 (-)	1299	WP_010995201.1	ABC transporter substrate-binding protein	-
PCC7120DELTA_RS07000 (alr1028)	pilM	1198932..1200038 (+)	1107	WP_010995202.1	type IV pilus assembly protein PilM	Machinery gene
PCC7120DELTA_RS07005 (alr1029)	-	1200141..1200908 (+)	768	WP_010995203.1	PilN domain-containing protein	-
PCC7120DELTA_RS07010 (alr1030)	-	1200905..1201666 (+)	762	WP_010995204.1	hypothetical protein	-
PCC7120DELTA_RS07015 (alr1031)	-	1201776..1204247 (+)	2472	WP_010995205.1	AMIN domain-containing protein	-
PCC7120DELTA_RS07020 (all1032)	-	1204412..1204915 (-)	504	WP_199315774.1	GNAT family N-acetyltransferase	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 40525.40 Da
• Isoelectric Point: 4.4583

>NTDB_id=21836 PCC7120DELTA_RS07000 WP_010995202.1 1198932..1200038(+) (pilM) [Nostoc sp. PCC 7120 = FACHB-418]
MVKSFSSLFGKSHRGVGVEIAPERVNVVQIRKQRQGLKLESLTSVPVPEGIVADGQITDPPAMAQLIQQALAESKIKVSR
VATGVPGRDSIVRIIPVPSELDDKELRDMVLNHEAGLYLPYPREEADVDYQKLGYFVDEDGIEKVRVLLVATRKEVTDTY
ISTFEQAGLQIGVLEINSFALIRTIRDQLRQFGPEEATVLVDIEFDSTEIAIIINGVPQFSRTVPIGTYQMQMAFARAMS
LPTSRDMEMLQGLVIPVNSVDSDKTGMTETDPGMAGVLRILGELTDELRRSIDFYLNQSENVEIAQILLGGPGGGLEQLH
EFFTQRLSIPTSQIDPIGSLSLQVDEEKYPSTQRSGLGIVLGLGMREV

Nucleotide

• Length: 1107 bp

>NTDB_id=21836 PCC7120DELTA_RS07000 WP_010995202.1 1198932..1200038(+) (pilM) [Nostoc sp. PCC 7120 = FACHB-418]
GTGGTGAAAAGTTTCAGTAGTCTGTTTGGCAAATCTCATAGAGGGGTAGGTGTAGAAATTGCACCAGAACGGGTGAATGT
AGTTCAAATACGCAAGCAGCGCCAAGGCTTGAAACTTGAATCTTTAACATCAGTTCCAGTTCCAGAGGGGATTGTCGCTG
ATGGTCAAATTACCGATCCCCCAGCAATGGCTCAATTAATTCAGCAGGCGCTAGCTGAAAGCAAAATCAAAGTATCTCGT
GTGGCTACTGGTGTACCTGGACGAGACTCGATTGTCCGTATCATACCTGTACCGTCAGAGTTGGATGACAAAGAATTACG
GGATATGGTGTTAAACCACGAAGCCGGGTTGTATTTACCCTATCCTCGTGAGGAAGCTGATGTAGATTATCAGAAACTTG
GGTACTTTGTAGATGAGGATGGCATTGAAAAGGTACGGGTTCTGTTAGTTGCTACCCGCAAGGAGGTAACAGATACATAT
ATTAGTACTTTTGAGCAGGCAGGCTTACAAATTGGTGTTTTAGAAATTAACAGTTTTGCACTAATTCGGACAATTCGTGA
TCAACTGCGGCAATTTGGGCCAGAAGAAGCAACAGTACTAGTTGATATAGAGTTCGACAGTACGGAAATTGCAATCATCA
TTAACGGCGTACCACAATTTTCCCGCACTGTTCCCATTGGAACTTATCAAATGCAAATGGCATTTGCTAGAGCTATGAGT
TTGCCCACTTCTAGAGATATGGAAATGTTACAGGGATTGGTGATTCCTGTAAATTCTGTAGATAGCGATAAAACGGGGAT
GACGGAAACTGACCCTGGTATGGCAGGCGTATTGCGAATCTTGGGAGAACTAACAGATGAGCTGCGCCGTTCTATTGATT
TTTACTTAAATCAGAGTGAAAACGTAGAAATAGCCCAGATTTTATTGGGTGGGCCTGGTGGTGGACTAGAACAACTTCAT
GAGTTTTTTACTCAACGTTTAAGTATTCCTACCAGTCAAATAGATCCTATAGGGTCTTTGTCCTTGCAAGTTGATGAAGA
AAAATATCCCTCTACACAACGTTCTGGTTTAGGAATAGTTCTTGGTTTAGGAATGAGGGAGGTATGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (17-238)

• Type IV pilus assembly protein PilM; (PilM_2) (283-367)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Synechocystis sp. PCC 6803	64.305	99.728	0.641