Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | CSF_RS05200 | Genome accession | NZ_CP019683 |
| Coordinates | 1050715..1051095 (+) | Length | 126 a.a. |
| NCBI ID | WP_089188281.1 | Uniprot ID | - |
| Organism | Campylobacter sputorum bv. faecalis CCUG 20703 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1045715..1056095
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSF_RS05180 (CSF_1036) | - | 1046580..1047677 (+) | 1098 | WP_089182622.1 | CinA family protein | - |
| CSF_RS05185 (CSF_1037) | ilvC | 1047744..1048766 (+) | 1023 | WP_089188279.1 | ketol-acid reductoisomerase | - |
| CSF_RS05190 (CSF_1038) | - | 1048807..1049964 (+) | 1158 | WP_151899096.1 | divergent polysaccharide deacetylase family protein | - |
| CSF_RS05195 (CSF_1039) | dprA | 1049948..1050718 (+) | 771 | WP_089182625.1 | DNA-processing protein DprA | Machinery gene |
| CSF_RS05200 (CSF_1040) | dprB | 1050715..1051095 (+) | 381 | WP_089188281.1 | Holliday junction resolvase RuvX | Machinery gene |
| CSF_RS09540 | - | 1051160..1051933 (+) | 774 | Protein_1032 | cache domain-containing protein | - |
| CSF_RS09545 | - | 1052714..1053115 (+) | 402 | Protein_1033 | methyl-accepting chemotaxis protein | - |
| CSF_RS05210 (CSF_1042) | - | 1053158..1053649 (-) | 492 | WP_089188283.1 | HIT family protein | - |
| CSF_RS05215 (CSF_1043) | trpC | 1053652..1054434 (-) | 783 | WP_089188284.1 | indole-3-glycerol phosphate synthase TrpC | - |
| CSF_RS05220 (CSF_1044) | - | 1054431..1055684 (-) | 1254 | WP_089188285.1 | tetratricopeptide repeat protein | - |
| CSF_RS05225 (CSF_1045) | - | 1055657..1056022 (-) | 366 | WP_089182631.1 | YkgJ family cysteine cluster protein | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 14090.40 Da Isoelectric Point: 9.7515
>NTDB_id=217784 CSF_RS05200 WP_089188281.1 1050715..1051095(+) (dprB) [Campylobacter sputorum bv. faecalis CCUG 20703]
MIVAIDVGLKRIGVAISYENGVVLPLNAVIRKNRNQASKEISQLLQDYKAKKLVVGIPLGGSSEDEMTRRIKHFVNLINF
DGEIIFIDESFSSKEASDFAVINHKKKDGKLDSLSAMIILKRYIEN
MIVAIDVGLKRIGVAISYENGVVLPLNAVIRKNRNQASKEISQLLQDYKAKKLVVGIPLGGSSEDEMTRRIKHFVNLINF
DGEIIFIDESFSSKEASDFAVINHKKKDGKLDSLSAMIILKRYIEN
Nucleotide
Download Length: 381 bp
>NTDB_id=217784 CSF_RS05200 WP_089188281.1 1050715..1051095(+) (dprB) [Campylobacter sputorum bv. faecalis CCUG 20703]
ATGATAGTAGCAATAGATGTTGGCTTAAAAAGAATAGGAGTTGCCATATCTTATGAAAATGGAGTAGTTTTGCCACTAAA
CGCAGTCATACGCAAAAATCGCAATCAAGCTTCAAAAGAAATAAGTCAGTTACTACAAGATTATAAAGCAAAAAAACTTG
TTGTTGGTATCCCACTTGGCGGAAGTAGCGAAGATGAGATGACTAGACGCATAAAACACTTTGTAAATTTAATCAATTTT
GATGGTGAGATAATTTTTATTGATGAGAGTTTTTCAAGTAAAGAAGCTAGCGATTTTGCCGTTATAAATCATAAGAAAAA
AGATGGAAAACTAGATAGTTTAAGTGCAATGATAATACTTAAAAGATATATTGAAAATTAA
ATGATAGTAGCAATAGATGTTGGCTTAAAAAGAATAGGAGTTGCCATATCTTATGAAAATGGAGTAGTTTTGCCACTAAA
CGCAGTCATACGCAAAAATCGCAATCAAGCTTCAAAAGAAATAAGTCAGTTACTACAAGATTATAAAGCAAAAAAACTTG
TTGTTGGTATCCCACTTGGCGGAAGTAGCGAAGATGAGATGACTAGACGCATAAAACACTTTGTAAATTTAATCAATTTT
GATGGTGAGATAATTTTTATTGATGAGAGTTTTTCAAGTAAAGAAGCTAGCGATTTTGCCGTTATAAATCATAAGAAAAA
AGATGGAAAACTAGATAGTTTAAGTGCAATGATAATACTTAAAAGATATATTGAAAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
50.376 |
100 |
0.532 |