Detailed information NTG0217417

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: CW750_RS06975
• Genome accession: NZ_CP025136
• Coordinates: 1415472..1418324 (+)
• Length: 950 a.a.
• NCBI ID: WP_061827221.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain WiKim0072
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1410472..1423324

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CW750_RS06960 (CW750_06955)	-	1410770..1412494 (+)	1725	WP_076647532.1	phospho-sugar mutase	-
CW750_RS06965 (CW750_06960)	-	1412619..1413251 (+)	633	WP_016264744.1	YfbR-like 5'-deoxynucleotidase	-
CW750_RS06970 (CW750_06965)	uvrB	1413459..1415462 (+)	2004	WP_094365654.1	excinuclease ABC subunit UvrB	Machinery gene
CW750_RS06975 (CW750_06970)	uvrA	1415472..1418324 (+)	2853	WP_061827221.1	excinuclease ABC subunit UvrA	Machinery gene
CW750_RS06980 (CW750_06975)	-	1418446..1418982 (+)	537	WP_016264747.1	DUF308 domain-containing protein	-
CW750_RS06985 (CW750_06980)	rapZ	1419108..1419992 (+)	885	WP_011374234.1	RNase adapter RapZ	-
CW750_RS06990 (CW750_06985)	-	1419989..1421023 (+)	1035	WP_035146453.1	YvcK family protein	-
CW750_RS06995 (CW750_06990)	whiA	1421026..1421970 (+)	945	WP_011374236.1	DNA-binding protein WhiA	-
CW750_RS07000 (CW750_06995)	-	1422062..1422517 (+)	456	WP_035146456.1	MarR family transcriptional regulator	-
CW750_RS07005 (CW750_07000)	-	1422632..1423156 (-)	525	WP_035146459.1	DsbA family protein	-

Sequence

Protein

• Length: 950 a.a.
• Molecular weight: 104671.92 Da
• Isoelectric Point: 5.9359

>NTDB_id=217417 CW750_RS06975 WP_061827221.1 1415472..1418324(+) (uvrA) [Latilactobacillus sakei strain WiKim0072]
MANDKIVIHGARAHNLKDIDVTIPRDKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLGQMDKPDVDSIDG
LSPAISIDQKTTSKNPRSTVGTVTEINDYLRLLWARVGQPICPNDGTEISSQSVEQMVDRVLALPERTKLQIMSPIVRGK
KGQHKKIFEKIQREGYVRVQVDGEVMDVSTDLELDKNKKHDINIVVDRIVVKDGVRSRLFDSFEAALRLSDGYATADVID
GEQLLFSEHYACPICGFTVGALEPRLFSFNAPFGACPECDGLGLKLEVDTDLVVPDTSKTLREGAIAPWNPISSQYYPQM
LEQACTAFKIDMDRPFSKLTPRQKDIILNGSQGKEFHFHYENDFGGVRDVEVPFEGVLSNIDRRYRETNSDFTRTQMRTY
MTELTCQTCHGKRLNRQALAVKVGGQDIAEVSDNAIKDGLPFFDHLELSEKDQVIAKPILKEVHDRLTFLINVGLDYLTL
SRSAGTLSGGEAQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLIGSLKKMRDLGNTLIVVEHDEDTMRAADYLIDI
GPGAGDLGGEVMAAGTPTEVEQNPNSLTGRYLAGQDYIPVPLKRRQGNGKKVRVTGAAENNLKDLTVDFPLGEFVAVTGV
SGSGKSTLVNTILKKALAQKMNRNSAKPGQYKTITGYQNLEKLINIDQSPIGRTPRSNPATYTGVFDNVRDLFAQTNEAK
LRGYKKGRFSFNVKGGRCEACKGDGIIKIEMNFLPDVYVPCEICHGSRYNSETLEVVYKGKNIAEILDMTVSEATEFFEN
IPKIARKLQTIVDVGLGYVTLGQSATTLSGGEAQRMKLASELQKQSTGKNLYILDEPTTGLHTDDIKRLLGVLERLVDEG
NTVLVIEHNLDVIKTADHIIDLGPEGGDKGGTIVATGTPETLVNVAESYTGRYLKPILERDTARTLAAQE

Nucleotide

• Length: 2853 bp

>NTDB_id=217417 CW750_RS06975 WP_061827221.1 1415472..1418324(+) (uvrA) [Latilactobacillus sakei strain WiKim0072]
ATGGCAAATGATAAGATAGTAATTCACGGCGCACGCGCCCATAATTTAAAGGATATCGATGTTACGATTCCAAGAGATAA
GTTAGTGGTCATCACCGGGTTATCTGGTTCTGGGAAGAGCTCTTTAGCATTTGATACGTTATATGCAGAAGGACAACGGC
GCTATGTTGAGAGTTTATCAGCATACGCGCGTCAGTTCTTAGGGCAAATGGATAAGCCGGATGTTGATTCAATTGACGGG
TTAAGTCCAGCGATTTCGATTGACCAAAAGACGACCTCTAAGAATCCACGTTCAACAGTTGGGACAGTCACTGAAATCAA
TGACTACCTCCGCTTATTGTGGGCCCGAGTTGGTCAACCCATCTGTCCAAATGATGGTACTGAAATCAGTAGCCAATCCG
TAGAACAAATGGTTGATCGGGTATTGGCTTTACCAGAACGGACTAAACTCCAAATTATGTCACCGATTGTTCGTGGCAAA
AAAGGGCAACACAAAAAAATCTTCGAGAAGATTCAGCGTGAAGGCTACGTTCGTGTCCAAGTGGATGGCGAAGTAATGGA
TGTTAGCACGGATTTAGAATTAGATAAGAATAAGAAACATGATATCAACATTGTTGTTGATCGAATCGTCGTTAAAGACG
GTGTTCGGTCACGGTTATTTGATTCGTTTGAAGCGGCTTTGAGACTATCTGACGGTTATGCGACAGCTGATGTGATTGAC
GGCGAACAACTCTTGTTTTCTGAACATTATGCTTGTCCAATCTGTGGCTTTACGGTTGGGGCATTAGAACCACGGTTATT
CTCATTTAACGCGCCATTTGGGGCATGTCCTGAATGTGACGGCCTAGGTTTAAAACTAGAAGTTGATACGGACCTCGTTG
TCCCAGATACAAGTAAAACATTGCGTGAAGGGGCGATTGCGCCTTGGAATCCAATCAGTTCGCAATATTACCCACAAATG
TTAGAACAAGCTTGCACGGCCTTTAAAATTGATATGGACCGTCCTTTCAGTAAGTTGACACCTCGCCAAAAAGATATCAT
CTTAAACGGCTCACAAGGCAAAGAATTCCACTTCCATTATGAAAATGATTTTGGTGGCGTTCGCGATGTTGAAGTCCCTT
TTGAAGGGGTCCTCAGCAATATTGACCGTCGTTATCGTGAAACGAATAGTGATTTCACACGGACGCAGATGCGGACCTAT
ATGACGGAATTAACATGTCAAACGTGTCACGGTAAGCGACTAAATCGTCAAGCCTTGGCAGTTAAAGTCGGTGGCCAAGA
TATCGCCGAAGTTTCAGACAATGCAATCAAGGATGGCCTCCCATTCTTTGACCATCTTGAACTTTCCGAAAAAGATCAAG
TGATTGCGAAACCCATTTTGAAAGAAGTCCATGATCGCCTGACTTTCTTGATTAATGTCGGCTTAGACTACTTAACGTTG
AGTCGGTCAGCTGGGACACTTTCCGGTGGGGAAGCACAACGGATTCGTTTGGCCACACAAATTGGATCGAACTTATCTGG
CGTGCTTTATATCTTAGACGAACCTTCAATTGGGTTGCATCAACGCGACAATGATCGCTTAATCGGTTCTTTGAAGAAGA
TGCGCGATTTAGGGAACACTTTAATCGTGGTTGAACATGATGAAGATACGATGCGAGCAGCCGATTATCTCATCGATATT
GGCCCAGGTGCTGGGGATCTCGGTGGGGAAGTGATGGCCGCTGGCACACCAACAGAAGTTGAACAGAATCCCAATTCCTT
AACGGGCCGTTATTTAGCGGGGCAGGATTATATTCCGGTACCGTTAAAACGACGTCAAGGGAATGGCAAAAAGGTGCGGG
TAACTGGCGCTGCCGAAAATAATTTAAAAGATTTAACGGTTGATTTTCCATTAGGTGAATTTGTCGCCGTGACTGGTGTT
TCTGGTTCTGGTAAATCAACATTAGTGAATACGATTTTGAAGAAGGCCCTTGCGCAAAAGATGAATCGTAATTCAGCTAA
ACCGGGTCAATATAAGACCATCACGGGTTATCAAAACCTTGAGAAGTTGATTAATATCGACCAAAGTCCAATTGGCCGCA
CACCGCGGAGTAACCCAGCAACTTATACCGGTGTCTTCGACAATGTCCGAGATTTATTCGCACAAACCAATGAAGCAAAG
TTACGGGGTTACAAGAAGGGCCGCTTTAGTTTTAATGTGAAGGGCGGTCGCTGTGAAGCCTGCAAGGGTGACGGGATTAT
CAAGATTGAAATGAATTTCTTACCGGATGTCTATGTCCCTTGTGAAATTTGTCATGGTAGTCGTTATAATTCGGAAACTT
TAGAAGTGGTTTATAAAGGTAAGAACATTGCTGAAATCTTGGATATGACCGTTTCTGAAGCAACTGAATTCTTCGAAAAC
ATTCCTAAGATTGCTCGTAAACTACAAACAATTGTCGATGTTGGTTTAGGTTATGTGACATTAGGCCAATCAGCAACAAC
CTTATCTGGTGGGGAAGCCCAACGGATGAAATTGGCTTCTGAATTGCAAAAACAATCAACGGGTAAGAATTTGTATATCT
TAGACGAACCAACAACAGGTTTGCATACGGATGATATTAAACGGTTGTTAGGGGTCTTAGAACGGTTAGTTGATGAAGGC
AACACTGTTTTAGTCATTGAACATAACCTTGACGTGATTAAAACGGCTGATCATATCATTGATTTAGGACCAGAAGGTGG
CGACAAAGGTGGTACGATCGTTGCGACCGGCACACCTGAAACATTGGTGAACGTCGCAGAAAGCTATACGGGACGTTATT
TGAAACCAATTTTAGAACGCGATACAGCGCGTACACTAGCGGCACAAGAATAA

Domains

Predicted by InterProScan.

• UvrA interaction domain (UvrA_inter) (132-237)

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-398)

• ABC transporter (ABC_tran) (622-858)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	75.77	99.053	0.751
uvrA	Streptococcus pneumoniae TIGR4	75.77	99.053	0.751
uvrA	Streptococcus pneumoniae D39	75.77	99.053	0.751