Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrC   Type   Regulator
Locus tag   BZ167_RS07675 Genome accession   NZ_CP019626
Coordinates   1601872..1601991 (-) Length   39 a.a.
NCBI ID   WP_003156334.1    Uniprot ID   I2C1C3
Organism   Bacillus sp. 275     
Function   antagonize RapC (predicted from homology)   
Competence regulation

Genomic Context

Location: 1596872..1606991
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BZ167_RS07650 (BZ167_07680) - 1597114..1597872 (-) 759 WP_003156330.1 ABC transporter ATP-binding protein -
  BZ167_RS07655 (BZ167_07685) - 1597866..1598813 (-) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  BZ167_RS07660 (BZ167_07690) ceuB 1598803..1599756 (-) 954 WP_015239156.1 ABC transporter permease Machinery gene
  BZ167_RS07665 (BZ167_07695) - 1600170..1601534 (+) 1365 WP_015239155.1 aspartate kinase -
  BZ167_RS07670 (BZ167_07700) - 1601629..1601724 (+) 96 WP_021495118.1 YjcZ family sporulation protein -
  BZ167_RS07675 (BZ167_07705) phrC 1601872..1601991 (-) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  BZ167_RS07680 (BZ167_07710) rapC 1601975..1603123 (-) 1149 WP_007410270.1 Rap family tetratricopeptide repeat protein Regulator
  BZ167_RS07685 (BZ167_07715) - 1603276..1604709 (-) 1434 WP_020955322.1 ATP-binding protein -
  BZ167_RS07690 (BZ167_07720) - 1604696..1605379 (-) 684 WP_007410267.1 response regulator transcription factor -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4228.96 Da        Isoelectric Point: 8.0285

>NTDB_id=217344 BZ167_RS07675 WP_003156334.1 1601872..1601991(-) (phrC) [Bacillus sp. 275]
MKLKSKWFVICLAAAAIFTVTGAGQTDQAEFHVAERGMT

Nucleotide


Download         Length: 120 bp        

>NTDB_id=217344 BZ167_RS07675 WP_003156334.1 1601872..1601991(-) (phrC) [Bacillus sp. 275]
ATGAAATTGAAATCTAAATGGTTTGTTATTTGTTTAGCAGCCGCCGCGATTTTTACAGTGACAGGTGCAGGCCAGACAGA
TCAGGCTGAATTCCATGTAGCTGAAAGAGGAATGACGTGA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C1C3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrC Bacillus subtilis subsp. subtilis str. 168

70

100

0.718

Multiple sequence alignment