Detailed information NTG0217320

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: CWI64_RS06860
• Genome accession: NZ_CP025076
• Coordinates: 1273526..1274623 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266658.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain BHN97x
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1268526..1279623

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CWI64_RS06835 (CWI64_06835)	pgsA	1269047..1269592 (-)	546	WP_000712132.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
CWI64_RS06840 (CWI64_06840)	rodZ	1269603..1270424 (-)	822	WP_001227958.1	cytoskeleton protein RodZ	-
CWI64_RS06845 (CWI64_06845)	-	1270466..1271749 (-)	1284	WP_000170202.1	pitrilysin family protein	-
CWI64_RS06850 (CWI64_06850)	-	1271746..1272996 (-)	1251	WP_000424265.1	pitrilysin family protein	-
CWI64_RS06855 (CWI64_06855)	yaaA	1273155..1273523 (+)	369	WP_000455899.1	S4 domain-containing protein YaaA	-
CWI64_RS06860 (CWI64_06860)	recF	1273526..1274623 (+)	1098	WP_000266658.1	DNA replication/repair protein RecF	Machinery gene
CWI64_RS06865 (CWI64_06865)	guaB	1274674..1276152 (-)	1479	WP_000073428.1	IMP dehydrogenase	-
CWI64_RS06870 (CWI64_06870)	trpS	1276304..1277329 (-)	1026	WP_000165444.1	tryptophan--tRNA ligase	-
CWI64_RS06875 (CWI64_06875)	-	1277535..1279157 (+)	1623	WP_000958770.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41944.05 Da
• Isoelectric Point: 8.6711

>NTDB_id=217320 CWI64_RS06860 WP_000266658.1 1273526..1274623(+) (recF) [Streptococcus pneumoniae strain BHN97x]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSAQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSKSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKAAVNEN

Nucleotide

• Length: 1098 bp

>NTDB_id=217320 CWI64_RS06860 WP_000266658.1 1273526..1274623(+) (recF) [Streptococcus pneumoniae strain BHN97x]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAACTTGGGCAAATTAAGCCAATCTATTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGCTCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCAGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAAATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCTATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAA
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAAGCTGCTGTAAATGAAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.178	100	0.992
recF	Bacillus subtilis subsp. subtilis str. 168	45.628	100	0.458