Detailed information    

insolico Bioinformatically predicted

Overview


Name   dsbA1   Type   Machinery gene
Locus tag   NMA_RS11255 Genome accession   NC_003116
Coordinates   2162325..2163023 (-) Length   232 a.a.
NCBI ID   WP_002215673.1    Uniprot ID   A0A0U1RKJ4
Organism   Neisseria meningitidis Z2491     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2157325..2168023
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMA_RS11240 (NMA2206) - 2157620..2158681 (-) 1062 WP_002251788.1 peptidylprolyl isomerase -
  NMA_RS11245 (NMA2207) - 2158786..2161194 (-) 2409 WP_002245292.1 LPS-assembly protein LptD -
  NMA_RS11250 (NMA2208) amgK 2161264..2162268 (+) 1005 WP_002215675.1 N-acetylmuramate/N-acetylglucosamine kinase AmgK -
  NMA_RS11255 (NMA2209) dsbA1 2162325..2163023 (-) 699 WP_002215673.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  NMA_RS15120 - 2163317..2163424 (-) 108 Protein_2113 IS5/IS1182 family transposase -
  NMA_RS11260 (NMA2210) murJ 2163482..2165020 (+) 1539 WP_002246748.1 murein biosynthesis integral membrane protein MurJ -
  NMA_RS11265 (NMA2211) - 2165153..2166109 (+) 957 WP_002236650.1 YheT family hydrolase -
  NMA_RS11270 (NMA2212) trpC 2166160..2166942 (+) 783 WP_002245839.1 indole-3-glycerol phosphate synthase TrpC -

Sequence


Protein


Download         Length: 232 a.a.        Molecular weight: 25245.84 Da        Isoelectric Point: 5.6016

>NTDB_id=21668 NMA_RS11255 WP_002215673.1 2162325..2163023(-) (dsbA1) [Neisseria meningitidis Z2491]
MKSKHLALGVAALFALAACDSKVQTSVPADSAPAASAAAAPAGLVEGQNYTVLANPIPQQQAGKVEVLEFFGYFCPHCAH
LEPVLSKHAKSFKDDMYLRTEHVVWQKEMLTLARLAAAVDMAAADSKDVANSHIFDAMVNQKIKLQEPEVLKKWLGEQTA
FDGKKVLAAYESPESQARADKMQELTETFQIDGTPTVIVGGKYKVEFADWESGMNTIDLLADKVREEQKAAH

Nucleotide


Download         Length: 699 bp        

>NTDB_id=21668 NMA_RS11255 WP_002215673.1 2162325..2163023(-) (dsbA1) [Neisseria meningitidis Z2491]
ATGAAATCCAAACACCTCGCCCTCGGCGTTGCCGCCCTGTTCGCACTTGCCGCGTGCGACAGCAAAGTCCAAACCAGCGT
CCCCGCCGACAGCGCGCCTGCCGCTTCGGCAGCCGCCGCCCCGGCAGGGCTGGTCGAAGGGCAAAACTATACTGTCCTTG
CCAACCCGATTCCCCAACAGCAGGCAGGCAAAGTCGAAGTCCTTGAGTTTTTCGGCTATTTCTGTCCGCACTGCGCCCAC
CTCGAACCTGTTTTAAGCAAACACGCCAAGTCTTTTAAAGACGATATGTACCTGCGTACCGAACACGTCGTCTGGCAGAA
AGAAATGCTGACGCTCGCACGCCTCGCCGCCGCCGTCGATATGGCTGCCGCCGACAGCAAAGATGTGGCGAACAGCCATA
TTTTCGATGCGATGGTCAACCAAAAAATCAAGCTGCAAGAGCCGGAAGTCCTCAAAAAATGGCTGGGCGAACAAACCGCC
TTTGACGGCAAAAAAGTCCTTGCCGCTTACGAATCTCCCGAAAGCCAGGCGCGCGCCGACAAAATGCAGGAGCTGACCGA
AACCTTCCAAATCGACGGTACGCCCACGGTTATCGTCGGCGGCAAATATAAAGTCGAATTTGCCGACTGGGAGTCCGGTA
TGAACACCATCGACCTTTTGGCGGACAAAGTACGCGAAGAACAAAAAGCCGCGCACTAA

Domains


Predicted by InterproScan.

(63-212)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0U1RKJ4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

98.707

100

0.987

  dsbA2 Neisseria meningitidis MC58

76.882

80.172

0.616


Multiple sequence alignment