Detailed information NTG0216559

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: CWQ20_RS10655
• Genome accession: NZ_CP025029
• Coordinates: 2012428..2013537 (+)
• Length: 369 a.a.
• NCBI ID: WP_000264870.1
• Uniprot ID: Q3JYE9
• Organism: Streptococcus agalactiae strain SGEHI2015-25
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2007428..2018537

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CWQ20_RS10630 (CWQ20_10630)	-	2007800..2008639 (-)	840	WP_000181757.1	energy-coupling factor ABC transporter ATP-binding protein	-
CWQ20_RS10635 (CWQ20_10635)	pgsA	2008639..2009181 (-)	543	WP_000239224.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
CWQ20_RS10640 (CWQ20_10640)	yfmH	2009304..2010587 (-)	1284	WP_000217765.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
CWQ20_RS10645 (CWQ20_10645)	yfmF	2010589..2011833 (-)	1245	WP_000706190.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
CWQ20_RS10650 (CWQ20_10650)	yaaA	2012072..2012425 (+)	354	WP_000384867.1	S4 domain-containing protein YaaA	-
CWQ20_RS10655 (CWQ20_10655)	recF	2012428..2013537 (+)	1110	WP_000264870.1	DNA replication/repair protein RecF	Machinery gene
CWQ20_RS10660 (CWQ20_10660)	-	2013549..2014415 (-)	867	WP_000398683.1	GRP family sugar transporter	-
CWQ20_RS10665 (CWQ20_10665)	-	2014471..2015133 (-)	663	WP_001871057.1	helix-turn-helix domain-containing protein	-
CWQ20_RS10670 (CWQ20_10670)	guaB	2015208..2016689 (-)	1482	WP_000073440.1	IMP dehydrogenase	-
CWQ20_RS10675 (CWQ20_10675)	-	2016846..2017331 (-)	486	WP_001034427.1	arginine repressor	-
CWQ20_RS10680 (CWQ20_10680)	-	2017341..2018021 (-)	681	WP_000628848.1	Crp/Fnr family transcriptional regulator	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42471.27 Da
• Isoelectric Point: 7.3132

>NTDB_id=216559 CWQ20_RS10655 WP_000264870.1 2012428..2013537(+) (recF) [Streptococcus agalactiae strain SGEHI2015-25]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LSLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLSVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFGSQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=216559 CWQ20_RS10655 WP_000264870.1 2012428..2013537(+) (recF) [Streptococcus agalactiae strain SGEHI2015-25]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCATCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGCGGCCAT
CTTAGCTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAGGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGCCTAAGACGGAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTATCAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAACATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGACCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGGTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAGCATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAATGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

3D structure

• AlphaFold DB: Q3JYE9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.636	98.374	0.626
recF	Bacillus subtilis subsp. subtilis str. 168	44.837	99.729	0.447