Detailed information NTG0216452

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: CWQ21_RS11025
• Genome accession: NZ_CP025028
• Coordinates: 2074484..2075593 (+)
• Length: 369 a.a.
• NCBI ID: WP_000264870.1
• Uniprot ID: Q3JYE9
• Organism: Streptococcus agalactiae strain SGEHI2015-95
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2069484..2080593

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CWQ21_RS11000 (CWQ21_11000)	-	2069856..2070695 (-)	840	WP_000181757.1	energy-coupling factor ABC transporter ATP-binding protein	-
CWQ21_RS11005 (CWQ21_11005)	pgsA	2070695..2071237 (-)	543	WP_000239224.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
CWQ21_RS11010 (CWQ21_11010)	-	2071360..2072643 (-)	1284	WP_000217765.1	pitrilysin family protein	-
CWQ21_RS11015 (CWQ21_11015)	-	2072645..2073889 (-)	1245	WP_000706190.1	pitrilysin family protein	-
CWQ21_RS11020 (CWQ21_11020)	yaaA	2074128..2074481 (+)	354	WP_000384867.1	S4 domain-containing protein YaaA	-
CWQ21_RS11025 (CWQ21_11025)	recF	2074484..2075593 (+)	1110	WP_000264870.1	DNA replication/repair protein RecF	Machinery gene
CWQ21_RS11030 (CWQ21_11030)	-	2075605..2076471 (-)	867	WP_000398683.1	GRP family sugar transporter	-
CWQ21_RS11035 (CWQ21_11035)	-	2076527..2077189 (-)	663	WP_001871057.1	helix-turn-helix transcriptional regulator	-
CWQ21_RS11040 (CWQ21_11040)	guaB	2077264..2078745 (-)	1482	WP_000073440.1	IMP dehydrogenase	-
CWQ21_RS11045 (CWQ21_11045)	-	2078902..2079387 (-)	486	WP_001034427.1	arginine repressor	-
CWQ21_RS11050 (CWQ21_11050)	-	2079397..2080077 (-)	681	WP_000628848.1	Crp/Fnr family transcriptional regulator	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42471.27 Da
• Isoelectric Point: 7.3132

>NTDB_id=216452 CWQ21_RS11025 WP_000264870.1 2074484..2075593(+) (recF) [Streptococcus agalactiae strain SGEHI2015-95]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LSLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLSVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFGSQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=216452 CWQ21_RS11025 WP_000264870.1 2074484..2075593(+) (recF) [Streptococcus agalactiae strain SGEHI2015-95]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCATCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGCGGCCAT
CTTAGCTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAGGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGCCTAAGACGGAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTATCAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAACATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGACCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGGTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAGCATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAATGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

3D structure

• AlphaFold DB: Q3JYE9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.636	98.374	0.626
recF	Bacillus subtilis subsp. subtilis str. 168	44.837	99.729	0.447