Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilN   Type   Machinery gene
Locus tag   NMA_RS03300 Genome accession   NC_003116
Coordinates   639103..639702 (-) Length   199 a.a.
NCBI ID   WP_002214520.1    Uniprot ID   Q4W563
Organism   Neisseria meningitidis Z2491     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 634103..644702
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMA_RS03285 (NMA0650) pilQ 635588..637873 (-) 2286 WP_002219789.1 type IV pilus secretin PilQ Machinery gene
  NMA_RS03290 (NMA0651) pilP 637892..638437 (-) 546 WP_002214522.1 pilus assembly protein PilP Machinery gene
  NMA_RS03295 (NMA0652) - 638455..639102 (-) 648 WP_002217908.1 type 4a pilus biogenesis protein PilO -
  NMA_RS03300 (NMA0653) pilN 639103..639702 (-) 600 WP_002214520.1 PilN domain-containing protein Machinery gene
  NMA_RS03305 (NMA0654) pilM 639705..640820 (-) 1116 WP_010981112.1 type IV pilus biogenesis protein PilM -
  NMA_RS03310 (NMA0655) - 640972..643368 (+) 2397 WP_002219786.1 penicillin-binding protein 1A -
  NMA_RS03315 (NMA0656) yihA 643489..644118 (-) 630 WP_002217904.1 ribosome biogenesis GTP-binding protein YihA/YsxC -

Sequence

Protein


Download         Length: 199 a.a.        Molecular weight: 22257.48 Da        Isoelectric Point: 9.5493

>NTDB_id=21636 NMA_RS03300 WP_002214520.1 639103..639702(-) (pilN) [Neisseria meningitidis Z2491]
MNNLIKINLLPYREEMNKRKQQQFKTLMYGAVLTGVAAVAATYLFIDNMINNQSERNTLLETSIAHLDTELSEIQKLKQE
KDAFLIKKNKIEELQLKRLQAAKILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN

Nucleotide


Download         Length: 600 bp        

>NTDB_id=21636 NMA_RS03300 WP_002214520.1 639103..639702(-) (pilN) [Neisseria meningitidis Z2491]
ATGAACAATTTAATCAAAATCAACCTCCTCCCCTACAGGGAAGAGATGAACAAGCGCAAACAGCAGCAGTTTAAAACGCT
GATGTACGGTGCCGTGCTGACGGGCGTTGCCGCCGTTGCGGCAACCTACCTGTTTATCGACAATATGATCAATAACCAGT
CGGAAAGAAACACGCTGCTGGAAACCTCCATCGCACACTTGGATACCGAGCTGTCGGAAATACAAAAGCTCAAACAGGAA
AAAGATGCCTTCCTGATTAAGAAAAACAAAATCGAGGAGCTCCAGCTCAAACGCCTCCAAGCCGCAAAAATCCTCGACAG
CCTGAATGAGGCCGTCCCCGGAAGCACCTACCTGACCTCGCTGGATGCCGTTACCGCCGACTCTTATCGGCTCAGCGGCA
GGACATCCAGCGACAACCGCGTTGCCGCCATGATGAGGGCGATGCCCAATACCGGCATATTCAAGCAACCCGAATTGTTA
AGCATCAAGAAAAACAATTCGCATCAAGAATTTACCCTTCAGGCAACATTACAACCCATCGTAAAGGCGGCCGAATCCAA
AGAGAATCCGGCTTCGGGAAACGCACAGGAGGCAAACTGA

Domains

Predicted by InterproScan.

Fimbrial assembly protein (PilN) (PilN)

(104-177)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q4W563

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilN Neisseria meningitidis strain C311

100

100

1

Multiple sequence alignment