Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   BWR56_RS08355 Genome accession   NZ_CP019562
Coordinates   1700888..1701925 (-) Length   345 a.a.
NCBI ID   WP_049501597.1    Uniprot ID   A0A3R9MUS5
Organism   Streptococcus oralis strain S.MIT/ORALIS-351     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1695888..1706925
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BWR56_RS08330 (BWR56_1652) - 1696782..1698113 (-) 1332 WP_076984803.1 hemolysin family protein -
  BWR56_RS08335 (BWR56_1653) endA 1698249..1699073 (-) 825 WP_061587302.1 DNA/RNA non-specific endonuclease Machinery gene
  BWR56_RS08340 (BWR56_1654) - 1699114..1699308 (-) 195 WP_000739700.1 DNA-directed RNA polymerase subunit beta -
  BWR56_RS08345 (BWR56_1655) murA 1699295..1700578 (-) 1284 WP_033629306.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  BWR56_RS08350 - 1700602..1700832 (-) 231 WP_076984804.1 DUF1146 family protein -
  BWR56_RS08355 (BWR56_1656) sepM 1700888..1701925 (-) 1038 WP_049501597.1 SepM family pheromone-processing serine protease Regulator
  BWR56_RS08360 (BWR56_1657) coaD 1701909..1702397 (-) 489 WP_076984805.1 pantetheine-phosphate adenylyltransferase -
  BWR56_RS08365 (BWR56_1658) rsmD 1702387..1702926 (-) 540 WP_000706943.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  BWR56_RS08370 (BWR56_1659) asnA 1702991..1703983 (-) 993 WP_000747998.1 aspartate--ammonia ligase -
  BWR56_RS08375 (BWR56_1660) - 1704093..1704776 (-) 684 WP_001076863.1 Bax inhibitor-1/YccA family protein -
  BWR56_RS08380 (BWR56_1661) - 1704831..1705571 (-) 741 WP_076984806.1 TrmH family RNA methyltransferase -
  BWR56_RS08385 (BWR56_1662) - 1705605..1705883 (+) 279 WP_001174609.1 acylphosphatase -
  BWR56_RS08390 (BWR56_1663) yidC 1705961..1706890 (+) 930 WP_025168797.1 membrane protein insertase YidC -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37525.72 Da        Isoelectric Point: 5.5304

>NTDB_id=216342 BWR56_RS08355 WP_049501597.1 1700888..1701925(-) (sepM) [Streptococcus oralis strain S.MIT/ORALIS-351]
MKKKTRWPLYVILALVLTFLAFVVPLPYYIEVPGGAEDIRRVLKVNETEDTEAGAYQFVTVGIRHATLSHLVYAWLTPFT
DIRSAKETTGGSTDAEFMRINQFYMQTSQNMAKYQGLKTAGKDIELKYLGVYVLTVTDNSTFKGILNIADTVTAVNDKTF
DSSKDLVDYVNSQQLGDTVKVTYEEDGKVKSAEGKIITLENGKNGIGIGLIDRTEVTSDVPIRFSTAGIGGPSAGLMFSL
AIYTQIADPGLRNGRVVAGTGTIDRDGNVGDIGGIDKKVVAASRQGANIFFAPDNPVTEEAKKADPNAKSNYETALEAAK
TIKTEMKIVPVKTLQDAIDYLKNNP

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=216342 BWR56_RS08355 WP_049501597.1 1700888..1701925(-) (sepM) [Streptococcus oralis strain S.MIT/ORALIS-351]
ATGAAGAAAAAAACTAGATGGCCCTTATATGTCATCCTAGCACTAGTATTGACTTTTTTAGCCTTTGTAGTACCTTTACC
ATACTACATAGAAGTTCCAGGTGGAGCGGAAGATATTCGTCGCGTTTTGAAAGTCAATGAAACAGAAGACACAGAAGCAG
GAGCTTACCAGTTTGTGACAGTCGGTATTCGACACGCAACCCTATCGCATCTTGTCTATGCTTGGTTAACGCCTTTCACG
GATATTAGAAGTGCCAAGGAGACTACGGGTGGCTCTACTGATGCAGAATTTATGCGGATCAATCAGTTCTACATGCAAAC
GTCCCAAAACATGGCCAAGTATCAAGGATTGAAGACGGCTGGAAAGGATATCGAACTCAAGTATCTGGGAGTTTATGTCT
TGACCGTGACGGACAATTCAACTTTTAAGGGCATTCTGAACATTGCAGATACCGTGACGGCTGTTAATGACAAAACATTT
GACAGTTCAAAAGACTTGGTCGACTATGTCAACTCTCAACAATTAGGGGATACGGTCAAGGTAACCTATGAAGAAGACGG
AAAAGTCAAGTCTGCAGAAGGTAAAATTATCACTCTCGAAAACGGGAAAAACGGGATTGGGATTGGCTTGATTGACCGTA
CGGAAGTGACCAGTGATGTTCCAATTCGCTTTTCAACAGCTGGTATCGGCGGACCAAGTGCCGGTCTCATGTTTAGTCTA
GCTATTTACACCCAGATAGCAGATCCAGGACTTCGTAATGGTCGCGTCGTTGCGGGAACGGGAACCATTGATCGCGATGG
AAATGTTGGCGACATCGGTGGAATTGACAAAAAAGTGGTTGCAGCCTCTCGTCAGGGAGCCAACATCTTTTTTGCTCCTG
ACAATCCAGTCACTGAGGAAGCAAAAAAAGCAGATCCAAATGCGAAAAGCAACTATGAAACAGCCCTAGAAGCTGCTAAA
ACGATTAAAACAGAGATGAAAATCGTTCCCGTTAAGACTTTGCAGGATGCAATTGATTACCTTAAAAACAATCCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A3R9MUS5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

59.649

99.13

0.591


Multiple sequence alignment