Detailed information    

insolico Bioinformatically predicted

Overview

Name   oppA   Type   Regulator
Locus tag   BZG42_RS08150 Genome accession   NZ_CP019557
Coordinates   1721592..1723379 (-) Length   595 a.a.
NCBI ID   WP_155995782.1    Uniprot ID   -
Organism   Streptococcus sp. DAT741     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1716592..1728379
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BZG42_RS08130 (BZG42_08190) - 1717392..1718294 (-) 903 WP_024531884.1 ABC transporter permease -
  BZG42_RS08135 (BZG42_08195) opp4B 1718305..1719261 (-) 957 WP_024531883.1 oligopeptide ABC transporter permease -
  BZG42_RS08140 (BZG42_08200) - 1719263..1720240 (-) 978 WP_050579600.1 ATP-binding cassette domain-containing protein -
  BZG42_RS08145 (BZG42_08205) - 1720209..1721207 (-) 999 WP_024531881.1 ABC transporter ATP-binding protein -
  BZG42_RS08150 (BZG42_08210) oppA 1721592..1723379 (-) 1788 WP_155995782.1 oligopeptide ABC transporter substrate-binding protein Regulator
  BZG42_RS08155 (BZG42_08215) pbp3 1723590..1724831 (+) 1242 WP_155995780.1 D-alanyl-D-alanine carboxypeptidase PBP3 -
  BZG42_RS08160 (BZG42_08220) sufB 1725065..1726480 (-) 1416 WP_120172170.1 Fe-S cluster assembly protein SufB -
  BZG42_RS08165 (BZG42_08225) - 1726654..1727094 (-) 441 WP_120172171.1 SUF system NifU family Fe-S cluster assembly protein -
  BZG42_RS08170 (BZG42_08230) - 1727081..1728301 (-) 1221 WP_155995778.1 cysteine desulfurase -

Sequence

Protein


Download         Length: 595 a.a.        Molecular weight: 65840.04 Da        Isoelectric Point: 4.7969

>NTDB_id=216233 BZG42_RS08150 WP_155995782.1 1721592..1723379(-) (oppA) [Streptococcus sp. DAT741]
MKKTTKLFALAGVTLLSVAALSACGSKKSNTAKQDLSFPSEVKQEGTAVADAQLKVAVVSATTSTGLLIDELTSNTTDST
FGGMVDISMFGYDGDRKLDDSGLAKAEFDVEGKKVKISLTGKDYKWSDGQPFTINDYIFTIKAMASKDYTGVRFDDKFLN
IVGMEDFVAGKASDISGIKKIDDYTVELSVKEMSPSMMYAGGKLPSYIQPEHIYKDIPVKDWESSEYSRTAKIVGMGPWK
VKEIVNGESITYVPNEHYFKGAPKTSSLKMDIVSPDTIVSEMKAGNYDIADMPSDQVDSYKNLSNLNVVGRLASSYEYIS
FNFGKYDSNQSKNVMDENAKMNDVKLRQAIAYAIDTKTAGEKLYHGLYHPAKSLIISFFGDLHDSELEGYTYNPEKAKKL
LDEAGYKDVDGDGIREGKDGKPFKISFAARKRTEANEALMQQYLAWWKEVGLNVELYTGRTIEPNSFYDMIEANDANIDM
YAAGWSTGYDPDPTGLWGPIAKFNMSRFVSDENTKLLEAFSSADSFDEKKNLENYKAWQKYAAEQAFAIPTFESETLTAL
NKRVKNYDNKLGSASGNGLAYENIELLADKGETAK

Nucleotide


Download         Length: 1788 bp        

>NTDB_id=216233 BZG42_RS08150 WP_155995782.1 1721592..1723379(-) (oppA) [Streptococcus sp. DAT741]
ATGAAGAAGACAACGAAACTTTTTGCACTTGCTGGTGTGACTCTCCTCTCAGTAGCGGCTCTTTCAGCATGTGGTTCTAA
GAAATCGAATACTGCAAAGCAAGATTTGTCATTCCCATCTGAAGTAAAACAAGAGGGAACTGCTGTAGCTGATGCGCAAC
TGAAAGTGGCTGTGGTCTCAGCTACAACTTCAACGGGTCTTTTGATTGACGAATTGACTTCAAATACCACTGACTCAACA
TTCGGTGGCATGGTTGATATTTCAATGTTTGGCTATGATGGTGACCGCAAGTTGGATGATTCAGGTCTTGCTAAGGCTGA
GTTTGATGTGGAAGGTAAAAAAGTAAAGATTAGCTTGACAGGTAAGGACTACAAGTGGTCTGATGGTCAACCGTTTACTA
TCAACGACTATATCTTCACCATCAAGGCAATGGCAAGCAAAGATTACACTGGTGTCCGTTTTGATGATAAATTCTTGAAC
ATCGTTGGTATGGAAGACTTTGTTGCCGGAAAAGCTTCTGACATCTCTGGGATCAAGAAAATTGATGATTACACAGTGGA
ATTGTCTGTGAAGGAAATGTCTCCGTCAATGATGTATGCTGGTGGTAAGTTACCTTCTTACATTCAACCAGAACACATTT
ATAAAGATATTCCAGTCAAAGACTGGGAGAGCAGCGAGTACTCACGTACAGCTAAGATTGTAGGTATGGGTCCTTGGAAG
GTTAAAGAAATCGTTAACGGTGAGTCTATCACATACGTTCCAAATGAGCATTACTTCAAGGGTGCGCCGAAAACAAGCTC
ATTGAAGATGGATATTGTATCACCTGACACAATCGTTTCTGAGATGAAGGCTGGTAACTACGATATTGCAGACATGCCAT
CAGATCAGGTGGATTCATATAAGAACTTGTCTAACCTTAATGTTGTTGGAAGACTTGCTTCAAGTTATGAGTATATCTCC
TTTAACTTTGGTAAATACGACAGCAATCAGTCTAAGAACGTGATGGACGAAAATGCTAAGATGAATGATGTGAAGCTTCG
CCAAGCGATTGCTTATGCAATTGATACGAAGACAGCGGGTGAAAAATTGTACCACGGTCTATACCATCCAGCTAAATCAT
TGATTATCTCCTTCTTCGGTGATCTTCATGATTCAGAATTGGAAGGCTACACTTACAATCCAGAAAAAGCTAAGAAACTC
TTGGATGAAGCTGGTTATAAGGATGTAGACGGAGATGGTATCCGCGAAGGTAAAGATGGTAAACCATTCAAGATTTCGTT
CGCAGCTCGTAAGCGTACAGAAGCTAACGAAGCTCTTATGCAGCAGTACCTTGCTTGGTGGAAAGAAGTTGGCTTGAATG
TTGAATTGTACACAGGTCGCACAATTGAACCTAACTCGTTCTACGATATGATTGAAGCAAACGATGCAAATATTGATATG
TATGCTGCTGGTTGGTCAACAGGATATGATCCAGATCCAACAGGTCTTTGGGGACCAATTGCGAAGTTCAACATGTCACG
CTTTGTTTCTGATGAAAATACTAAGTTATTAGAAGCGTTTAGCTCGGCAGACTCATTTGATGAGAAGAAAAACCTTGAAA
ACTACAAGGCATGGCAAAAATATGCTGCTGAGCAAGCATTTGCTATTCCAACATTCGAGTCAGAGACATTGACAGCTCTC
AACAAGCGTGTGAAGAACTATGATAATAAACTTGGTTCAGCGTCAGGCAATGGTCTTGCTTATGAAAATATTGAGCTTCT
TGCAGACAAGGGTGAAACTGCGAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(122-502)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  oppA Streptococcus suis isolate S10

84.564

100

0.847

Multiple sequence alignment