Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   BZG42_RS07250 Genome accession   NZ_CP019557
Coordinates   1541495..1542544 (-) Length   349 a.a.
NCBI ID   WP_155995512.1    Uniprot ID   -
Organism   Streptococcus sp. DAT741     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1536495..1547544
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BZG42_RS07230 (BZG42_07300) nadE 1537478..1538302 (+) 825 WP_155972360.1 ammonia-dependent NAD(+) synthetase -
  BZG42_RS07235 (BZG42_07305) - 1539072..1539590 (-) 519 WP_024533153.1 VanZ family protein -
  BZG42_RS07240 (BZG42_07310) rlmN 1539587..1540699 (-) 1113 WP_155995514.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  BZG42_RS07245 (BZG42_07315) - 1540708..1541364 (-) 657 WP_155964235.1 YutD-like domain-containing protein -
  BZG42_RS07250 (BZG42_07320) sepM 1541495..1542544 (-) 1050 WP_155995512.1 SepM family pheromone-processing serine protease Regulator
  BZG42_RS07255 (BZG42_07325) coaD 1542531..1543019 (-) 489 WP_024533097.1 pantetheine-phosphate adenylyltransferase -
  BZG42_RS07260 (BZG42_07330) rsmD 1543009..1543548 (-) 540 WP_120172021.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  BZG42_RS07265 (BZG42_07335) - 1544025..1544750 (-) 726 WP_120172022.1 serine protease -
  BZG42_RS07270 (BZG42_07340) - 1544808..1545194 (-) 387 WP_120172023.1 rhodanese-like domain-containing protein -
  BZG42_RS07275 (BZG42_07345) - 1545194..1545412 (-) 219 WP_024533101.1 YqgQ family protein -
  BZG42_RS07280 (BZG42_07350) - 1545724..1546326 (-) 603 WP_120172024.1 response regulator transcription factor -
  BZG42_RS07285 (BZG42_07355) - 1546323..1547387 (-) 1065 WP_155964939.1 sensor histidine kinase -

Sequence


Protein


Download         Length: 349 a.a.        Molecular weight: 37593.80 Da        Isoelectric Point: 4.8734

>NTDB_id=216229 BZG42_RS07250 WP_155995512.1 1541495..1542544(-) (sepM) [Streptococcus sp. DAT741]
MKKNRKLLLITSIVLGTLLIWFTVFVPLPYYLESPGGAADIRQVLTVNNQVDEKEGSYNFTYVSVQQATALQLLAAQFDP
HTSVRSAEEMAGGANSAEYFRIARFYMETSQNMAKYQGLTLAGKEANMKFFGVYVLNLAEDSTFKSILNIADTVVSINGK
TFESSPDLIKYVSGLELGSDVTVGYISDGEEKSAKGKIIKLANGKNGIGIGLVDHTEVQSSVPIDFQTGNIGGPSAGLMF
TLAIYTQLADPDLRDGRMIAGTGTIEKYGKVGDIGGADKKVLSAAKAGASIFFVPNNPVDEAILKLNPNAKTNYEEAKES
AEKAGVDIEIVPVQTVQDAIDYLKKTKSE

Nucleotide


Download         Length: 1050 bp        

>NTDB_id=216229 BZG42_RS07250 WP_155995512.1 1541495..1542544(-) (sepM) [Streptococcus sp. DAT741]
ATGAAAAAAAATAGAAAACTACTCTTAATCACATCCATTGTTTTAGGAACTCTTTTGATTTGGTTTACTGTCTTTGTTCC
CCTACCTTATTATCTAGAAAGTCCTGGAGGAGCTGCTGATATTCGTCAAGTATTAACAGTAAATAATCAAGTAGACGAGA
AAGAGGGATCTTACAATTTTACTTATGTGTCTGTTCAGCAAGCTACAGCTTTGCAACTGTTAGCAGCCCAGTTTGACCCG
CATACAAGTGTGCGATCAGCTGAAGAGATGGCAGGTGGTGCCAATAGTGCAGAGTACTTCCGTATCGCTCGCTTCTACAT
GGAAACTTCACAGAATATGGCCAAATACCAAGGGTTAACCTTGGCAGGAAAAGAAGCGAATATGAAGTTCTTTGGCGTAT
ATGTTCTCAACTTGGCAGAAGATTCTACTTTTAAAAGTATTCTTAATATTGCTGATACAGTTGTTAGTATCAACGGAAAA
ACCTTTGAATCATCACCAGATTTAATCAAGTATGTTAGTGGTTTAGAATTGGGCAGTGATGTTACAGTTGGCTATATCAG
CGATGGGGAAGAAAAATCGGCCAAGGGTAAGATTATCAAATTAGCTAATGGTAAGAATGGTATTGGAATTGGTCTTGTTG
ATCATACGGAGGTTCAAAGCTCAGTTCCAATTGATTTCCAAACAGGTAATATAGGTGGACCAAGTGCAGGACTGATGTTC
ACTTTAGCTATCTATACTCAATTGGCAGATCCTGATTTGCGCGATGGACGGATGATTGCAGGAACGGGTACCATAGAAAA
ATATGGTAAGGTTGGAGATATTGGTGGAGCAGATAAAAAGGTTTTATCAGCGGCTAAAGCGGGAGCAAGTATCTTCTTTG
TTCCAAATAATCCAGTTGATGAAGCCATTTTGAAGCTGAATCCAAATGCCAAGACCAATTATGAAGAAGCGAAAGAATCC
GCTGAGAAGGCGGGTGTGGATATTGAAATTGTCCCTGTCCAGACTGTTCAAGACGCTATTGATTATCTTAAGAAGACAAA
GAGCGAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

60.519

99.427

0.602


Multiple sequence alignment