Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   CFP59_RS14700 Genome accession   NZ_CP025018
Coordinates   3679990..3680793 (+) Length   267 a.a.
NCBI ID   WP_069867872.1    Uniprot ID   A0A9X2LWT8
Organism   Streptomyces sp. M56     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3674990..3685793
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CFP59_RS14685 (CFP59_02892) - 3675255..3675860 (-) 606 WP_069867870.1 YdbC family protein -
  CFP59_RS14690 (CFP59_02893) - 3676048..3678912 (-) 2865 WP_069867871.1 vitamin B12-dependent ribonucleotide reductase -
  CFP59_RS14695 (CFP59_02894) nrdR 3679027..3679548 (-) 522 WP_030842751.1 transcriptional regulator NrdR -
  CFP59_RS14700 (CFP59_02895) dinR/lexA 3679990..3680793 (+) 804 WP_069867872.1 transcriptional repressor LexA Regulator
  CFP59_RS14705 (CFP59_02896) - 3680930..3682930 (-) 2001 WP_100805969.1 ATP-dependent DNA helicase -
  CFP59_RS14710 (CFP59_02897) - 3683190..3683888 (-) 699 WP_093703742.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29079.85 Da        Isoelectric Point: 7.0669

>NTDB_id=216063 CFP59_RS14700 WP_069867872.1 3679990..3680793(+) (dinR/lexA) [Streptomyces sp. M56]
MTTTAESATITAQERSQSRLEQTHAMNQTHPMNEDATNPEGQKPTRSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRR
GYPPSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPSAQPTDTTGKPAASYVPLVGRIAAGGPI
LAEESVEDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLL
PHNAAYQPIPGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 804 bp        

>NTDB_id=216063 CFP59_RS14700 WP_069867872.1 3679990..3680793(+) (dinR/lexA) [Streptomyces sp. M56]
GTGACCACCACCGCAGAGAGCGCCACTATTACCGCCCAGGAGCGCTCCCAGAGCCGACTCGAACAGACACACGCGATGAA
CCAGACCCACCCGATGAACGAAGACGCCACGAACCCGGAGGGGCAGAAGCCCACGCGATCGCTACCAGGGCGACCTCCAG
GCATCCGGGCGGACAGCTCAGGGCTGACCGACCGGCAGCGGCGCGTCATCGAGGTCATTCGCGACTCTGTGCAGCGGCGC
GGTTACCCGCCGTCCATGCGGGAGATCGGCCAGGCGGTGGGCCTCTCCAGCACCTCGTCCGTCGCCCATCAGCTGATGGC
TCTGGAGCGGAAGGGCTTTCTGCGACGCGACCCCCATCGGCCCCGGGCCTACGAGGTCCGCGGCTCCGACCAGCCCAGCG
CCCAGCCCACGGACACCACCGGCAAGCCCGCCGCCTCCTATGTGCCGTTGGTCGGCCGGATCGCGGCCGGTGGGCCGATC
CTCGCCGAGGAGTCGGTCGAGGATGTTTTCCCGCTCCCCCGGCAGCTGGTCGGCGACGGTGAGCTCTTCGTGTTGAAGGT
GGTCGGCGACTCCATGATCGAGGCCGCCATCTGCGATGGGGACTGGGTGACGGTGCGCCGTCAGCCCGTCGCCGAGAACG
GCGACATCGTCGCCGCGATGCTCGACGGTGAGGCCACGGTGAAGCGCTTCAAGCGGGAGGACGGCCATGTGTGGCTGCTC
CCGCACAACGCCGCCTACCAGCCGATCCCCGGCGACGAGGCCACCATTCTGGGCAAGGTGGTCGCGGTGTTGCGGCGCGT
CTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(149-261)

LexA DNA binding domain (LexA_DNA_bind)

(60-123)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9X2LWT8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.226

79.401

0.367

Multiple sequence alignment