Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   CU118_RS03900 Genome accession   NZ_CP024998
Coordinates   777215..777838 (-) Length   207 a.a.
NCBI ID   WP_001208755.1    Uniprot ID   P65819
Organism   Staphylococcus aureus strain 55-99-44     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 772215..782838
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CU118_RS03875 (CU118_03875) rpmG 773792..773941 (+) 150 WP_001265708.1 50S ribosomal protein L33 -
  CU118_RS03880 (CU118_03880) rpsN 774394..774663 (+) 270 WP_001085655.1 30S ribosomal protein S14 -
  CU118_RS03885 (CU118_03885) guaC 774820..775797 (+) 978 WP_054190611.1 GMP reductase -
  CU118_RS03895 (CU118_03895) - 775819..776835 (+) 1017 WP_171973432.1 CAP domain-containing protein -
  CU118_RS03900 (CU118_03900) dinR/lexA 777215..777838 (-) 624 WP_001208755.1 transcriptional repressor LexA Regulator
  CU118_RS03905 (CU118_03905) sosA 777981..778214 (+) 234 WP_077446722.1 DNA damage-induced cell division inhibitor SosA -
  CU118_RS03910 (CU118_03910) - 778398..779714 (+) 1317 WP_054190390.1 ISL3 family transposase -
  CU118_RS03915 (CU118_03915) - 779848..780087 (+) 240 WP_000071351.1 DUF896 domain-containing protein -
  CU118_RS03920 (CU118_03920) recP/tkt 780208..782196 (+) 1989 WP_054190754.1 transketolase Machinery gene
  CU118_RS03925 (CU118_03925) - 782474..782716 (+) 243 WP_000246909.1 YneF family protein -
  CU118_RS03930 (CU118_03930) - 782703..782801 (+) 99 WP_054190753.1 hypothetical protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23331.55 Da        Isoelectric Point: 4.8811

>NTDB_id=215988 CU118_RS03900 WP_001208755.1 777215..777838(-) (dinR/lexA) [Staphylococcus aureus strain 55-99-44]
MRELTKRQSEIYNYIKQVVQMKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=215988 CU118_RS03900 WP_001208755.1 777215..777838(-) (dinR/lexA) [Staphylococcus aureus strain 55-99-44]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAATGAAAGGTTATCCGCCTAG
TGTTCGTGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GCTATATAAGAAGAGATCCAACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCAGTAGAAAATATTGAAGAATATTT
TCCATTACCTGAACATTTAACATCGACACACAATAGCGATATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACC
GAGGAAGATGAAGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTCGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65819

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657

Multiple sequence alignment