Detailed information
Bioinformatically predicted
Overview
| Name | pilJ | Type | Machinery gene |
| Locus tag | BZG33_RS03335 | Genome accession | NZ_CP019466 |
| Coordinates | 564019..564981 (+) | Length | 320 a.a. |
| NCBI ID | WP_047921846.1 | Uniprot ID | A0AA44ZGD9 |
| Organism | Neisseria gonorrhoeae strain RIVM0610 | ||
| Function | type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 559019..569981
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BZG33_RS03300 (BZG33_03240) | - | 559568..560077 (+) | 510 | WP_003687909.1 | isoprenylcysteine carboxyl methyltransferase family protein | - |
| BZG33_RS03310 (BZG33_03250) | - | 560309..560890 (-) | 582 | WP_003690895.1 | superoxide dismutase | - |
| BZG33_RS03320 (BZG33_03260) | dnaB | 561054..562457 (+) | 1404 | WP_012503477.1 | replicative DNA helicase | - |
| BZG33_RS03325 (BZG33_03265) | pilH | 562714..563376 (+) | 663 | WP_047916986.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| BZG33_RS03330 (BZG33_03270) | pilI | 563408..564022 (+) | 615 | WP_012503479.1 | type IV pilus modification protein PilV | Machinery gene |
| BZG33_RS03335 (BZG33_03275) | pilJ | 564019..564981 (+) | 963 | WP_047921846.1 | PilW family protein | Machinery gene |
| BZG33_RS03340 (BZG33_03280) | pilK | 564960..565568 (+) | 609 | WP_047921847.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| BZG33_RS03345 (BZG33_03285) | pilL | 565570..566043 (+) | 474 | WP_012503482.1 | PilX family type IV pilin | Machinery gene |
| BZG33_RS03350 (BZG33_03290) | - | 566113..566421 (-) | 309 | WP_003706588.1 | AzlD family protein | - |
| BZG33_RS03355 (BZG33_03295) | - | 566418..567129 (-) | 712 | Protein_562 | AzlC family ABC transporter permease | - |
| BZG33_RS03360 (BZG33_03300) | dut | 567295..567747 (+) | 453 | WP_003701071.1 | dUTP diphosphatase | - |
| BZG33_RS03365 (BZG33_03305) | dapC | 567819..569006 (+) | 1188 | WP_003701073.1 | succinyldiaminopimelate transaminase | - |
| BZG33_RS03370 (BZG33_03310) | yaaA | 569162..569941 (+) | 780 | WP_003687925.1 | peroxide stress protein YaaA | - |
Sequence
Protein
Download Length: 320 a.a. Molecular weight: 35251.96 Da Isoelectric Point: 8.4268
>NTDB_id=215962 BZG33_RS03335 WP_047921846.1 564019..564981(+) (pilJ) [Neisseria gonorrhoeae strain RIVM0610]
MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSVIVLIAVVSSYFTSRKLNDAANERLAIQQDLRNAATLIVRDARMAGSFG
CFNMSEHTEKDVVSDVAQKNRLFSLKMNSTNKVISNGTDNKLIPIAESLNIRYQGFTHRPNALIFQYGIDDANASAETTV
VSSCGAISKPGKQIPTLEDAKKELKIQDSDKEQNGNIARQRHVVNAYAVGRFGNNEEGLFRFQLDDKGEWGNPQLLAKKV
KRMDVRYIYVSDCPEDEDAGKEEQFKYTGKFDSSVTPAGVEVLLDSGSDAKIAASSDNIIYAYRINATIRGGNVCANRTL
MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSVIVLIAVVSSYFTSRKLNDAANERLAIQQDLRNAATLIVRDARMAGSFG
CFNMSEHTEKDVVSDVAQKNRLFSLKMNSTNKVISNGTDNKLIPIAESLNIRYQGFTHRPNALIFQYGIDDANASAETTV
VSSCGAISKPGKQIPTLEDAKKELKIQDSDKEQNGNIARQRHVVNAYAVGRFGNNEEGLFRFQLDDKGEWGNPQLLAKKV
KRMDVRYIYVSDCPEDEDAGKEEQFKYTGKFDSSVTPAGVEVLLDSGSDAKIAASSDNIIYAYRINATIRGGNVCANRTL
Nucleotide
Download Length: 963 bp
>NTDB_id=215962 BZG33_RS03335 WP_047921846.1 564019..564981(+) (pilJ) [Neisseria gonorrhoeae strain RIVM0610]
ATGAAACGTAAAATGCTAAACGTACCAAAGGGCGGTTATGATGGTATGAAGGGTTTTACCATTGTTGAATTTCTGGTTGC
GGGCCTGCTCAGTGTGATTGTCCTGATAGCGGTCGTATCGAGTTACTTTACATCCCGGAAATTAAATGATGCGGCAAACG
AGCGTCTTGCCATTCAACAGGATTTGCGGAATGCGGCAACATTGATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGTTTCAATATGTCTGAGCATACCGAAAAGGATGTTGTTTCCGATGTGGCGCAAAAAAACCGTCTTTTTTCCTTAAAAAT
GAACAGTACAAATAAAGTTATCTCCAACGGTACAGATAATAAACTTATCCCCATAGCGGAATCTTTAAATATCAGATATC
AGGGTTTTACCCATCGCCCTAACGCATTGATTTTCCAATACGGAATCGATGATGCTAATGCAAGCGCCGAGACTACCGTC
GTCAGCAGCTGTGGCGCAATATCGAAACCGGGTAAGCAAATCCCTACTTTAGAAGATGCAAAAAAAGAATTGAAGATTCA
GGATTCTGATAAGGAGCAAAATGGCAATATAGCGCGTCAAAGGCATGTGGTCAATGCCTATGCGGTCGGCAGGTTTGGCA
ATAATGAGGAAGGTTTGTTCCGCTTCCAATTGGATGATAAGGGCGAGTGGGGTAATCCTCAGTTGCTCGCGAAAAAGGTT
AAACGTATGGATGTGCGGTATATCTATGTTTCCGATTGTCCTGAAGATGAAGATGCCGGCAAAGAGGAACAATTCAAATA
TACGGGTAAATTCGACAGCTCTGTTACGCCTGCCGGGGTGGAGGTTTTATTGGATAGCGGTAGTGATGCCAAGATTGCCG
CTTCTTCAGATAATATTATTTATGCTTACCGTATCAATGCGACAATACGCGGGGGAAATGTATGCGCAAACAGAACGCTT
TGA
ATGAAACGTAAAATGCTAAACGTACCAAAGGGCGGTTATGATGGTATGAAGGGTTTTACCATTGTTGAATTTCTGGTTGC
GGGCCTGCTCAGTGTGATTGTCCTGATAGCGGTCGTATCGAGTTACTTTACATCCCGGAAATTAAATGATGCGGCAAACG
AGCGTCTTGCCATTCAACAGGATTTGCGGAATGCGGCAACATTGATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGTTTCAATATGTCTGAGCATACCGAAAAGGATGTTGTTTCCGATGTGGCGCAAAAAAACCGTCTTTTTTCCTTAAAAAT
GAACAGTACAAATAAAGTTATCTCCAACGGTACAGATAATAAACTTATCCCCATAGCGGAATCTTTAAATATCAGATATC
AGGGTTTTACCCATCGCCCTAACGCATTGATTTTCCAATACGGAATCGATGATGCTAATGCAAGCGCCGAGACTACCGTC
GTCAGCAGCTGTGGCGCAATATCGAAACCGGGTAAGCAAATCCCTACTTTAGAAGATGCAAAAAAAGAATTGAAGATTCA
GGATTCTGATAAGGAGCAAAATGGCAATATAGCGCGTCAAAGGCATGTGGTCAATGCCTATGCGGTCGGCAGGTTTGGCA
ATAATGAGGAAGGTTTGTTCCGCTTCCAATTGGATGATAAGGGCGAGTGGGGTAATCCTCAGTTGCTCGCGAAAAAGGTT
AAACGTATGGATGTGCGGTATATCTATGTTTCCGATTGTCCTGAAGATGAAGATGCCGGCAAAGAGGAACAATTCAAATA
TACGGGTAAATTCGACAGCTCTGTTACGCCTGCCGGGGTGGAGGTTTTATTGGATAGCGGTAGTGATGCCAAGATTGCCG
CTTCTTCAGATAATATTATTTATGCTTACCGTATCAATGCGACAATACGCGGGGGAAATGTATGCGCAAACAGAACGCTT
TGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilJ | Neisseria gonorrhoeae MS11 |
87.5 |
100 |
0.875 |