Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   CVT30_RS17695 Genome accession   NZ_CP024989
Coordinates   4155459..4156583 (+) Length   374 a.a.
NCBI ID   WP_045562654.1    Uniprot ID   A0ABU4N0A4
Organism   Streptomyces sp. AMCC400023     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4150459..4161583
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CVT30_RS17685 (CVT30_17910) - 4152371..4153765 (+) 1395 WP_045562656.1 hypothetical protein -
  CVT30_RS17690 (CVT30_17915) radA/sms 4153968..4155377 (+) 1410 WP_045562655.1 DNA repair protein RadA Machinery gene
  CVT30_RS17695 (CVT30_17920) disA 4155459..4156583 (+) 1125 WP_045562654.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  CVT30_RS17700 (CVT30_17925) - 4156636..4157475 (-) 840 WP_045562653.1 hypothetical protein -
  CVT30_RS17705 (CVT30_17930) - 4157822..4158868 (+) 1047 WP_093791999.1 LLM class flavin-dependent oxidoreductase -
  CVT30_RS17710 (CVT30_17935) - 4159027..4159980 (+) 954 WP_193382171.1 A/G-specific adenine glycosylase -
  CVT30_RS17715 (CVT30_17940) - 4160276..4160827 (+) 552 WP_045562650.1 SigE family RNA polymerase sigma factor -
  CVT30_RS17720 (CVT30_17945) - 4160815..4161495 (+) 681 WP_045562649.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40151.00 Da        Isoelectric Point: 5.0029

>NTDB_id=215902 CVT30_RS17695 WP_045562654.1 4155459..4156583(+) (disA) [Streptomyces sp. AMCC400023]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGFDKTVEPMCTGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSKILRAGVQLVPDPMIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALHELDALTHAELLELPTVARALGYTGSPEGMDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=215902 CVT30_RS17695 WP_045562654.1 4155459..4156583(+) (disA) [Streptomyces sp. AMCC400023]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCTCACT
GAGCGCCGTGGCCCCAGGCACGGCCCTGCGCGACGGGCTTGAACGGATTCTCCGCGGCAACACCGGCGGACTCATCGTGC
TGGGCTTCGACAAGACCGTCGAGCCGATGTGCACCGGCGGTTTCGTCCTGGATGTCGAGTTCACCGCCACGCGTCTGCGT
GAGCTGTGCAAGCTCGACGGCGGCATCGTGCTGTCCTCGGACCTCTCCAAGATCCTCCGTGCGGGCGTCCAGCTGGTCCC
CGACCCGATGATCCCCACGGAGGAGACGGGCACCCGCCACCGCACGGCCGACCGCGTCAGCAAGCAGGTGGGTTTCCCGG
TCGTCTCGGTCTCCCAGTCGATGCGCCTCATCGCGCTCTACGTCGACGGACAGCGCCGTGTCCTGGAGGACTCGGCCGCG
ATCCTCTCCCGGGCGAACCAGGCCCTCGCCACCCTGGAGCGCTACAAGCTGCGCCTGGACGAGGTGGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTCTCGGCGGTCGCCCAGCGGCTGGAGATGGTCCGCCGCATCG
CCACCGAAATCGCCGAATACGTGGTCGAACTGGGCACGGACGGCCGTCTCCTGGCCCTCCAGCTCGACGAACTGATCGCG
GGCGTGGAACCGGAGCGCGAGCTGGTGGTCCGGGACTACGTCCCCGAGCCCACCGCCAAGCGCTCCCGCACGGTCGACGA
GGCCCTCCACGAACTGGACGCCCTCACCCACGCCGAGCTCCTCGAACTGCCCACGGTCGCCCGCGCCCTCGGCTACACCG
GCTCCCCCGAGGGCATGGACTCGGCCGTCTCCCCGCGCGGCTTCCGCCTCCTCGCGAAGGTCCCGCGCCTCCCGGGCGCC
ATCATCGACCGCCTCGTGGAACACTTCGGCGGCCTCCAGAAGCTGCTGGCGGCCAGCGTCGACGACCTCCAGACGGTCGA
CGGCGTCGGCGAGGCCCGGGCCCGCAGCGTCCGCGAGGGCCTGTCCCGCCTGGCGGAGTCGTCCATCCTGGAACGCTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.875

96.524

0.433