Detailed information NTG0215868

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: CVO91_RS12740
• Genome accession: NZ_CP024974
• Coordinates: 2508433..2509527 (+)
• Length: 364 a.a.
• NCBI ID: WP_002941760.1
• Uniprot ID: -
• Organism: Streptococcus suis strain CZ130302
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2503433..2514527

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CVO91_RS13190	-	2503658..2503807 (-)	150	WP_002941771.1	hypothetical protein	-
CVO91_RS12705 (CVO91_12705)	-	2503819..2504013 (-)	195	WP_241033700.1	hypothetical protein	-
CVO91_RS12710 (CVO91_12710)	-	2504022..2504450 (-)	429	WP_002941769.1	hypothetical protein	-
CVO91_RS12715 (CVO91_12715)	-	2504896..2505303 (-)	408	WP_002941767.1	hypothetical protein	-
CVO91_RS12720 (CVO91_12720)	-	2505321..2505518 (-)	198	WP_002941765.1	helix-turn-helix transcriptional regulator	-
CVO91_RS12725 (CVO91_12725)	-	2505726..2506253 (+)	528	WP_002941764.1	helix-turn-helix transcriptional regulator	-
CVO91_RS12730 (CVO91_12730)	-	2506737..2507909 (+)	1173	WP_002941762.1	site-specific integrase	-
CVO91_RS12735 (CVO91_12735)	-	2508047..2508430 (+)	384	WP_002941761.1	RNA-binding S4 domain-containing protein	-
CVO91_RS12740 (CVO91_12740)	recF	2508433..2509527 (+)	1095	WP_002941760.1	DNA replication/repair protein RecF	Machinery gene
CVO91_RS12745 (CVO91_12745)	guaB	2509797..2511278 (-)	1482	WP_002941758.1	IMP dehydrogenase	-
CVO91_RS12750 (CVO91_12750)	trpS	2511507..2512532 (-)	1026	WP_002941757.1	tryptophan--tRNA ligase	-
CVO91_RS12755 (CVO91_12755)	-	2512896..2513768 (+)	873	WP_002941756.1	YitT family protein	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 42275.38 Da
• Isoelectric Point: 7.0557

>NTDB_id=215868 CVO91_RS12740 WP_002941760.1 2508433..2509527(+) (recF) [Streptococcus suis strain CZ130302]
MWLERLELQHFRNYNQLDIEFHKGLNVFLGENAQGKTNILESIYVLALTRSHRTRTDKDLLQFQEKELSISGLLHRTSGK
VPLDIHLTDKGRVTKVNHLKQAKLSNYIGHMNVVLFAPEDLQLIKGAPALRRKFIDVELGQIKPLYLSDLSNYNHVLKQR
NTYLKSTDKIDENFLSVLDQQLAEYGSRVIQHRIDFLKKLEEFGNRKVQEISGNREELTIEYKTSIELTDDVNLIDKFLT
ELERCRKRDLFKKNTGVGPHRDDVAFFINGMNAHYGSQGQHRSLVLSLKLAEIELMKEVTREYPILLLDDVMSELDNNRQ
IKLLETITDTIQTFITTTSLDHLHKLPDNLKIFHIESSKVTESE

Nucleotide

• Length: 1095 bp

>NTDB_id=215868 CVO91_RS12740 WP_002941760.1 2508433..2509527(+) (recF) [Streptococcus suis strain CZ130302]
ATGTGGCTAGAACGATTAGAGTTACAACATTTTCGCAATTACAACCAATTAGATATTGAGTTCCACAAAGGGCTCAATGT
CTTTTTAGGCGAAAACGCCCAAGGAAAAACCAATATTCTAGAATCTATCTATGTTTTAGCCTTAACACGAAGTCATCGAA
CACGGACAGATAAGGACCTACTACAGTTTCAAGAAAAGGAATTATCTATTTCTGGTTTACTCCATCGCACAAGCGGTAAA
GTTCCCCTTGACATTCACTTGACAGATAAGGGGCGAGTGACCAAGGTCAACCATCTCAAACAAGCCAAGCTTTCCAACTA
TATCGGCCACATGAATGTTGTTCTCTTCGCCCCTGAAGATTTACAGCTGATAAAAGGTGCGCCTGCTTTGAGAAGAAAGT
TCATCGATGTCGAGCTCGGGCAAATCAAGCCACTCTATCTCTCTGACCTATCGAATTATAATCACGTTTTAAAACAAAGA
AATACTTACCTCAAATCTACAGATAAGATTGATGAGAACTTCCTATCCGTGTTAGATCAGCAACTTGCTGAATATGGTAG
TCGTGTTATCCAACATCGTATTGACTTTCTAAAGAAATTAGAGGAATTTGGAAATAGAAAAGTTCAAGAAATATCTGGCA
ATCGGGAAGAATTGACAATCGAATACAAAACCTCAATCGAATTGACAGATGATGTCAATTTAATTGACAAATTCTTGACA
GAATTGGAAAGGTGTCGCAAACGTGATTTATTTAAGAAAAATACAGGAGTTGGACCACATCGAGATGATGTAGCTTTCTT
TATAAATGGAATGAATGCCCATTATGGTAGCCAAGGTCAGCACCGCAGTCTCGTTCTGTCACTCAAACTGGCTGAAATTG
AGCTGATGAAAGAAGTCACACGAGAGTACCCAATTCTACTCTTAGATGATGTTATGAGTGAGCTGGATAATAATCGTCAA
ATCAAACTACTAGAAACTATTACAGATACGATTCAAACATTTATTACAACGACATCTTTAGACCATTTACATAAGCTACC
TGATAATTTAAAAATCTTCCATATTGAGTCTAGTAAGGTTACTGAGTCAGAATAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-356)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	69.806	99.176	0.692
recF	Bacillus subtilis subsp. subtilis str. 168	43.243	100	0.44