Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   CVO91_RS10740 Genome accession   NZ_CP024974
Coordinates   2106881..2107921 (-) Length   346 a.a.
NCBI ID   WP_002942358.1    Uniprot ID   -
Organism   Streptococcus suis strain CZ130302     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2101881..2112921
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CVO91_RS10705 (CVO91_10705) - 2102657..2102965 (-) 309 WP_002942377.1 YlxQ-related RNA-binding protein -
  CVO91_RS10710 (CVO91_10710) - 2102952..2103248 (-) 297 WP_002942375.1 YlxR family protein -
  CVO91_RS10715 (CVO91_10715) nusA 2103265..2104407 (-) 1143 WP_002942372.1 transcription termination factor NusA -
  CVO91_RS10720 (CVO91_10720) rimP 2104481..2104951 (-) 471 WP_002942369.1 ribosome maturation factor RimP -
  CVO91_RS10725 (CVO91_10725) - 2105182..2105370 (+) 189 WP_002942363.1 hypothetical protein -
  CVO91_RS10730 (CVO91_10730) trmB 2105405..2106040 (-) 636 WP_002942362.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  CVO91_RS10735 (CVO91_10735) - 2106037..2106831 (-) 795 WP_002942360.1 phosphotransferase family protein -
  CVO91_RS10740 (CVO91_10740) pptB 2106881..2107921 (-) 1041 WP_002942358.1 ABC transporter permease Regulator
  CVO91_RS10745 (CVO91_10745) pptA 2107918..2108652 (-) 735 WP_002942356.1 ABC transporter ATP-binding protein Regulator
  CVO91_RS10750 (CVO91_10750) - 2108715..2109128 (+) 414 WP_002942351.1 HIT family protein -
  CVO91_RS10755 (CVO91_10755) - 2109130..2109459 (+) 330 WP_002942350.1 hypothetical protein -
  CVO91_RS10765 (CVO91_10765) - 2109993..2111186 (-) 1194 WP_002942349.1 LCP family protein -
  CVO91_RS10770 (CVO91_10770) - 2111183..2111710 (-) 528 WP_002942346.1 GNAT family N-acetyltransferase -
  CVO91_RS10775 (CVO91_10775) tsaE 2111703..2112143 (-) 441 WP_029179276.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 346 a.a.        Molecular weight: 40120.50 Da        Isoelectric Point: 10.1278

>NTDB_id=215849 CVO91_RS10740 WP_002942358.1 2106881..2107921(-) (pptB) [Streptococcus suis strain CZ130302]
MKELFQQRRLDFLNRCSKYLRYVLNDHFVLVLMVLLGFLSLQYRQLLLLFPENPLPIVFVVIAISLLVLVSGRIATYLEE
ADQIFLLTKEKDILQGLEGAARRTVLFWSSIQVVVQLVLLPIYLKLGLPVWMIVAGLLTLLVLKCLFVKRQLVAYQSQGV
LDWSKAIPDEQKRKQSILRFFALFTTVKGISTTVKPRSYLNGILRLVKSRQTWFYLYLRAFLRSGDYLGLTIRLLLLAIL
SLFAIEESWLSIGLVLVFHYLLVFQLLGLYKHYDYQYVTQLYPLEKDSKKIGLQNLLRVILYSLLVVELGFALLFSKENA
MVVVLLLVGIFLHEIYLPLKLKKLID

Nucleotide


Download         Length: 1041 bp        

>NTDB_id=215849 CVO91_RS10740 WP_002942358.1 2106881..2107921(-) (pptB) [Streptococcus suis strain CZ130302]
ATGAAAGAATTGTTTCAACAACGCCGACTAGATTTTTTAAATCGTTGTTCCAAGTATCTGCGCTATGTTCTGAATGATCA
TTTTGTTTTGGTTCTCATGGTTTTATTAGGCTTTTTGAGTTTGCAATACCGTCAATTATTGTTGTTATTCCCTGAGAATC
CGTTGCCGATTGTTTTTGTGGTTATTGCAATCAGTCTACTGGTACTAGTGTCCGGAAGAATTGCGACTTATCTAGAAGAA
GCTGATCAAATCTTCCTATTGACCAAGGAAAAAGACATTCTGCAAGGACTCGAGGGTGCAGCCAGACGCACGGTCTTGTT
TTGGTCCTCTATACAGGTGGTGGTTCAGCTTGTTTTGTTACCAATCTATTTGAAACTGGGTTTACCGGTGTGGATGATTG
TAGCTGGTCTTCTTACTTTGTTGGTTTTAAAATGTCTTTTTGTTAAGCGCCAATTAGTGGCTTATCAGTCACAGGGAGTA
TTGGACTGGTCTAAGGCTATTCCAGATGAACAAAAAAGGAAACAGTCTATTTTACGTTTCTTTGCCTTATTTACGACGGT
TAAAGGAATCAGTACGACTGTTAAACCGAGAAGCTATCTCAATGGAATCTTGCGTCTCGTCAAGTCGAGACAGACTTGGT
TTTATCTCTACTTACGGGCTTTCTTGCGTTCAGGAGACTACTTGGGCTTGACGATACGTCTACTGTTGTTGGCGATTTTG
TCCCTATTTGCCATTGAAGAATCGTGGTTATCTATCGGCCTAGTTTTAGTCTTTCATTATTTGCTTGTCTTCCAGTTGTT
GGGGCTTTACAAGCATTATGATTATCAATATGTAACACAACTGTATCCTCTAGAGAAAGATTCCAAGAAAATCGGTCTTC
AGAATTTGCTTAGAGTGATTTTATATAGTCTATTAGTAGTGGAATTGGGCTTTGCTCTGCTATTTTCTAAAGAGAATGCG
ATGGTAGTCGTCTTACTTCTCGTGGGGATTTTCTTGCATGAAATATATTTGCCTCTAAAATTAAAAAAATTGATTGACTA
A

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(153-329)

Bacterial ABC transporter protein EcsB (EcsB)

(2-158)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus salivarius strain HSISS4

45.739

100

0.465
  pptB Streptococcus thermophilus LMD-9

45.17

100

0.46