Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   PspR76_RS28745 Genome accession   NZ_CP019428
Coordinates   6336795..6337202 (-) Length   135 a.a.
NCBI ID   WP_003176671.1    Uniprot ID   C3K3J6
Organism   Pseudomonas sp. R76     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6331795..6342202
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PspR76_RS28730 (PspR76_29245) - 6333798..6335849 (-) 2052 WP_159960627.1 methyl-accepting chemotaxis protein -
  PspR76_RS28735 (PspR76_29250) - 6335846..6336370 (-) 525 WP_159960629.1 chemotaxis protein CheW -
  PspR76_RS28740 (PspR76_29255) pilH 6336383..6336748 (-) 366 WP_159960631.1 twitching motility response regulator PilH -
  PspR76_RS28745 (PspR76_29260) pilG 6336795..6337202 (-) 408 WP_003176671.1 twitching motility response regulator PilG Regulator
  PspR76_RS28750 (PspR76_29265) gshB 6337442..6338395 (+) 954 WP_159960633.1 glutathione synthase -
  PspR76_RS28755 (PspR76_29270) - 6338473..6339378 (+) 906 WP_159960635.1 energy transducer TonB -
  PspR76_RS28760 (PspR76_29275) - 6339551..6340120 (+) 570 WP_078739562.1 YqgE/AlgH family protein -
  PspR76_RS28765 (PspR76_29280) ruvX 6340120..6340557 (+) 438 WP_003195067.1 Holliday junction resolvase RuvX -
  PspR76_RS28770 (PspR76_29285) pyrR 6340630..6341136 (+) 507 WP_159960637.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  PspR76_RS28775 (PspR76_29290) - 6341161..6342165 (+) 1005 WP_159960639.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14936.43 Da        Isoelectric Point: 7.3842

>NTDB_id=215700 PspR76_RS28745 WP_003176671.1 6336795..6337202(-) (pilG) [Pseudomonas sp. R76]
MEQHSNALRVMVIDDSKTIRRTAETLLKNVGCDVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
SIPVIMLSSKDGLFDKAKGRIVGVDQFLTKPFSKEELLSAIKAYVPGFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=215700 PspR76_RS28745 WP_003176671.1 6336795..6337202(-) (pilG) [Pseudomonas sp. R76]
ATGGAACAGCATTCCAACGCCTTGAGAGTGATGGTGATCGACGATTCGAAAACGATCCGCCGCACCGCCGAAACCCTGTT
GAAGAACGTGGGGTGCGATGTCATCACGGCCATCGACGGTTTCGATGCCCTGGCCCGAATTGTTGATCATCACCCGCACA
TTATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGGTGAAGAACAACCCGGCGTTCAAG
TCGATCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTGGGTGTCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGAGTGCGATCAAGGCCTACGTGCCCGGCTTCGCCGCAGTAGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB C3K3J6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70.4

92.593

0.652
  vicR Streptococcus mutans UA159

38.889

93.333

0.363

Multiple sequence alignment