Detailed information NTG0215567

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: CV723_RS05885
• Genome accession: NZ_CP024953
• Coordinates: 1204786..1205586 (-)
• Length: 266 a.a.
• NCBI ID: WP_000835251.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain 7.13
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1199786..1210586

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CV723_RS05855 (CV723_05870)	recJ	1200136..1201686 (+)	1551	WP_000810776.1	single-stranded-DNA-specific exonuclease RecJ	-
CV723_RS05860 (CV723_05875)	-	1201686..1202582 (+)	897	WP_001117136.1	RluA family pseudouridine synthase	-
CV723_RS05865 (CV723_05880)	-	1202715..1203275 (-)	561	WP_000037134.1	hypothetical protein	-
CV723_RS05870 (CV723_05885)	-	1203259..1203597 (-)	339	WP_000699916.1	hypothetical protein	-
CV723_RS05875 (CV723_05890)	-	1203785..1204258 (-)	474	WP_013195909.1	tetratricopeptide repeat protein	-
CV723_RS05880 (CV723_05895)	dprB	1204385..1204789 (-)	405	WP_000599159.1	Holliday junction resolvase RuvX	Machinery gene
CV723_RS05885 (CV723_05900)	dprA	1204786..1205586 (-)	801	WP_000835251.1	DNA-processing protein DprA	Machinery gene
CV723_RS05890 (CV723_05905)	minE	1205593..1205826 (-)	234	WP_000051414.1	cell division topological specificity factor MinE	-
CV723_RS05895 (CV723_05910)	minD	1205823..1206629 (-)	807	WP_001019050.1	septum site-determining protein MinD	-
CV723_RS05900 (CV723_05915)	ilvC	1206653..1207645 (-)	993	WP_001207748.1	ketol-acid reductoisomerase	-
CV723_RS05910 (CV723_05925)	-	1207894..1208676 (+)	783	WP_001168242.1	NAD+ synthase	-
CV723_RS05915 (CV723_05930)	-	1208673..1209611 (+)	939	WP_000833945.1	tetraacyldisaccharide 4'-kinase	-
CV723_RS05920 (CV723_05935)	pseH	1209544..1210086 (-)	543	WP_000742654.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29879.74 Da
• Isoelectric Point: 6.9617

>NTDB_id=215567 CV723_RS05885 WP_000835251.1 1204786..1205586(-) (dprA) [Helicobacter pylori strain 7.13]
MKSHFQYSVLENIPKAFDILKDPPKQLYCVGDIKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPTTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMEDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=215567 CV723_RS05885 WP_000835251.1 1204786..1205586(-) (dprA) [Helicobacter pylori strain 7.13]
ATGAAAAGCCATTTCCAATACAGCGTACTAGAAAATATCCCTAAAGCCTTTGACATACTCAAAGACCCTCCTAAACAGCT
CTATTGTGTGGGCGATATAAAGCTTTTAGAAGCGCCTTTAAAAGTGGCGATCATAGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGGGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAACAACGATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCTACGAA
CAATCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCATTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGTAGCGCGAGATTAGCCCAAAAATACCAAAAACCCTTGTTTGTTTTACCCCAACGCCTGAATGAAAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGGAAGATGAATTTTTAGAATATTGTGCGAAAAACCCTAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterProScan.

• DNA recombination-mediator protein A (DNA_processg_A) (13-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	97.368	100	0.974
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414