Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   BWQ98_RS06025 Genome accession   NZ_CP019299
Coordinates   1136985..1137794 (-) Length   269 a.a.
NCBI ID   WP_001289493.1    Uniprot ID   Q9RCS5
Organism   Streptococcus pneumoniae strain HKU1-14     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1131985..1142794
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BWQ98_RS06005 (BWQ98_06015) - 1134327..1135313 (+) 987 WP_000204727.1 L-lactate dehydrogenase -
  BWQ98_RS06010 (BWQ98_06020) - 1135576..1136349 (-) 774 WP_000725951.1 ion channel -
  BWQ98_RS06015 (BWQ98_06025) - 1136396..1136650 (-) 255 WP_001823540.1 type II toxin-antitoxin system RelE/ParE family toxin -
  BWQ98_RS06020 (BWQ98_06030) - 1136652..1136894 (-) 243 WP_000208080.1 DUF6290 family protein -
  BWQ98_RS06025 (BWQ98_06035) vicX 1136985..1137794 (-) 810 WP_001289493.1 MBL fold metallo-hydrolase Regulator
  BWQ98_RS06030 (BWQ98_06040) micB 1137796..1139145 (-) 1350 WP_000886210.1 cell wall metabolism sensor histidine kinase VicK Regulator
  BWQ98_RS06035 (BWQ98_06045) micA 1139138..1139842 (-) 705 WP_000722076.1 response regulator YycF Regulator
  BWQ98_RS06040 (BWQ98_06050) mutY 1139897..1141072 (-) 1176 WP_000886147.1 A/G-specific adenine glycosylase -
  BWQ98_RS11730 - 1141169..1141294 (+) 126 WP_001818232.1 hypothetical protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29916.89 Da        Isoelectric Point: 6.1743

>NTDB_id=214688 BWQ98_RS06025 WP_001289493.1 1136985..1137794(-) (vicX) [Streptococcus pneumoniae strain HKU1-14]
MSEIGFKYSILASGSSGNSFYLETSKKKLLVDAGLSGKKITSLLAEINRKPEDLDAILITHEHSDHIHGVGVLARKYGMD
LYANEKTWQAMENSKYLGKVDSSQKHIFEMGKTKTFGDIDIESFGVSHDAVAPQFYRFMKDDKSFVLLTDTGYVSDRMAG
IVENADGYLIEANHDVEILRSGSYAWRLKQRILSDLGHLSNEDGAEAMIRTLGNRTKKIYLGHLSKENNIKELAHMTMVN
QLAQADLGVGVDFKVYDTSPDTATPLTEI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=214688 BWQ98_RS06025 WP_001289493.1 1136985..1137794(-) (vicX) [Streptococcus pneumoniae strain HKU1-14]
ATGAGTGAAATAGGCTTTAAATACAGTATTTTAGCGTCGGGTTCCAGTGGAAATTCTTTTTATCTGGAAACCTCAAAAAA
GAAGCTTTTAGTAGATGCAGGCTTGTCTGGCAAGAAAATTACCAGTCTGCTAGCTGAAATTAACCGTAAGCCAGAAGACC
TGGATGCCATCTTGATTACCCATGAGCATTCAGATCATATCCATGGAGTAGGCGTTTTGGCTCGCAAGTATGGTATGGAT
CTTTATGCCAATGAAAAGACCTGGCAAGCTATGGAAAATAGTAAATATCTTGGCAAGGTGGATTCTTCGCAAAAGCATAT
TTTTGAAATGGGTAAAACCAAAACCTTTGGAGATATCGACATCGAGAGTTTTGGTGTAAGCCATGATGCAGTCGCACCGC
AGTTCTATCGCTTTATGAAGGATGATAAGAGTTTTGTCCTTTTGACAGATACAGGTTATGTCAGTGACCGTATGGCGGGC
ATTGTCGAAAATGCGGATGGCTATCTTATCGAGGCCAACCATGATGTAGAGATTTTGCGATCAGGTTCTTACGCTTGGCG
ACTCAAACAACGAATCCTATCTGACCTTGGTCACCTTTCTAACGAGGACGGTGCTGAAGCTATGATTCGGACGCTAGGAA
ATCGTACTAAGAAGATTTACCTTGGGCATTTATCTAAGGAAAATAATATCAAGGAACTGGCTCATATGACCATGGTCAAT
CAGCTGGCTCAAGCTGATCTGGGAGTCGGAGTAGACTTTAAGGTTTATGATACCTCACCAGATACCGCAACACCATTGAC
AGAGATATAA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9RCS5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.323

100

0.773

Multiple sequence alignment