Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilS   Type   Regulator
Locus tag   BVG18_RS01285 Genome accession   NZ_CP019143
Coordinates   279567..281132 (-) Length   521 a.a.
NCBI ID   WP_004281058.1    Uniprot ID   A0A2K8UN05
Organism   Acinetobacter lwoffii strain ZS207     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 274567..286132
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BVG18_RS01270 (BVG18_06890) gpmI 275377..276924 (+) 1548 WP_086044363.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase -
  BVG18_RS01275 (BVG18_06895) - 276955..278127 (+) 1173 WP_086044364.1 S41 family peptidase -
  BVG18_RS01280 (BVG18_06900) pilR 278128..279552 (-) 1425 WP_086044365.1 sigma-54 dependent transcriptional regulator Regulator
  BVG18_RS01285 (BVG18_06905) pilS 279567..281132 (-) 1566 WP_004281058.1 ATP-binding protein Regulator
  BVG18_RS01290 (BVG18_06910) - 281155..281790 (-) 636 WP_004281059.1 response regulator -
  BVG18_RS01295 (BVG18_06915) - 282010..283071 (+) 1062 WP_004281060.1 serine hydrolase -
  BVG18_RS01300 (BVG18_06920) thrC 283129..284268 (-) 1140 WP_004281061.1 threonine synthase -
  BVG18_RS01305 (BVG18_06925) - 284325..285632 (-) 1308 WP_034605826.1 homoserine dehydrogenase -

Sequence

Protein


Download         Length: 521 a.a.        Molecular weight: 59620.86 Da        Isoelectric Point: 6.3552

>NTDB_id=213365 BVG18_RS01285 WP_004281058.1 279567..281132(-) (pilS) [Acinetobacter lwoffii strain ZS207]
MAQQKNYAELNQYHLGIWYSAYRLLISTGLLLIFMLTYPELTTDYQYPQLYYYALGIGVAINTVQLFVLKWIRRLIQPQL
IMIFFSDVCVLSLLTLASDGPNLQIGLLFVITIFSASLLLDAKKALVVTLVAVISVIYQHFIGSIFAFSSLSNISNSALL
AFLFFVVYGTGQIAIRRFQILENLNFSQSLELHRLQNINRYILEQIETGYLVLDENYHVVLSNPAACNLLGIESKYGHEK
FTLSQSQPDLFELIHFETLENGERFQFESQQSRYNIHVQVQKLIVPHQTLMLLVLQDAKKLNQQVQQLKLAALGQLSASI
AHEIRNPLAAIVQANDLYLDSETEQQQVLHQMIGRQATRIDRIIQDTLNMVKNKETHPVPIHLNEFIPLFIQEDLADIRD
QIQFNIDIPLVIQFDEAQFRQILINLIRNAIRHNSADAAYIQLNVHPYEHRVWIDVRDFGSGVAVHDQALLFKPFFSTSI
SGTGLGLYLSHSFCEANQAQLNYIQQEQGACFRISCQRITL

Nucleotide


Download         Length: 1566 bp        

>NTDB_id=213365 BVG18_RS01285 WP_004281058.1 279567..281132(-) (pilS) [Acinetobacter lwoffii strain ZS207]
ATGGCACAACAAAAAAACTATGCTGAACTGAATCAATACCATCTCGGTATCTGGTACAGCGCTTATCGTCTGCTGATCAG
CACCGGTTTGTTGCTGATTTTTATGCTGACCTACCCCGAACTCACCACCGATTATCAATACCCGCAGCTGTATTATTATG
CACTGGGAATCGGGGTTGCGATCAATACCGTACAGCTGTTTGTGCTGAAATGGATCAGACGCCTGATCCAGCCGCAGCTG
ATTATGATTTTCTTTAGCGATGTCTGCGTTTTAAGTTTGCTGACTTTGGCGAGCGACGGTCCTAATCTGCAAATCGGGCT
GCTGTTTGTGATTACTATCTTTTCTGCATCTTTATTATTAGATGCAAAAAAGGCCTTGGTCGTCACGCTGGTTGCTGTTA
TCAGCGTAATTTATCAGCATTTTATCGGCAGTATTTTTGCATTTTCATCACTCAGCAATATCAGTAATAGCGCCTTGCTG
GCCTTTTTATTTTTTGTGGTCTATGGCACTGGACAAATTGCCATACGCCGCTTTCAGATTCTGGAAAATCTAAATTTTTC
TCAATCGCTGGAACTGCATCGCTTACAGAATATTAACCGCTATATTCTGGAGCAGATTGAAACCGGCTATCTGGTTCTGG
ATGAAAACTACCATGTGGTACTCAGTAATCCTGCCGCCTGTAATCTTCTTGGAATTGAGTCCAAATACGGCCATGAGAAA
TTCACCTTATCTCAGTCACAGCCAGATTTATTTGAACTGATCCATTTTGAAACGCTAGAAAATGGTGAGCGCTTTCAGTT
TGAATCCCAACAAAGTCGCTATAATATTCATGTGCAAGTACAAAAGCTGATTGTGCCGCATCAGACTCTAATGCTACTGG
TGTTACAGGATGCCAAAAAACTGAATCAGCAGGTGCAGCAACTTAAACTTGCTGCACTGGGTCAACTCTCGGCCAGTATT
GCCCATGAAATTCGTAATCCATTGGCGGCTATTGTACAGGCCAATGATTTATATCTGGATTCAGAAACTGAACAACAACA
AGTGCTCCACCAGATGATTGGTCGACAGGCGACCCGGATTGACCGGATTATTCAGGACACGCTGAATATGGTCAAAAATA
AAGAAACCCATCCGGTGCCGATTCATCTCAATGAATTTATCCCGTTATTTATCCAGGAAGATCTGGCCGATATTCGCGAT
CAGATTCAATTTAATATTGATATCCCGCTGGTGATTCAGTTTGATGAAGCACAGTTCCGGCAAATCCTGATTAATCTGAT
TCGTAATGCGATTCGTCACAATTCAGCCGATGCAGCCTATATTCAGCTGAATGTGCATCCCTATGAACATCGGGTCTGGA
TTGATGTACGGGATTTTGGCTCTGGCGTAGCCGTACATGATCAAGCTCTATTGTTCAAACCCTTTTTTAGCACATCGATT
AGTGGTACCGGATTAGGATTGTATTTATCACATAGTTTTTGCGAAGCAAATCAGGCACAATTAAACTATATACAACAAGA
ACAGGGCGCATGCTTTCGCATCAGCTGTCAACGTATTACGCTTTAA

Domains

Predicted by InterproScan.

His Kinase A (phospho-acceptor) domain (HisKA)

(312-373)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(415-515)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2K8UN05

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilS Acinetobacter baumannii strain A118

56.634

96.929

0.549

Multiple sequence alignment