Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | FORC54_RS13555 | Genome accession | NZ_CP019121 |
| Coordinates | 2686055..2686672 (+) | Length | 205 a.a. |
| NCBI ID | WP_011079558.1 | Uniprot ID | Q7MHU7 |
| Organism | Vibrio vulnificus strain FORC_054 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2681055..2691672
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FORC54_RS13535 (FORC54_2454) | - | 2681362..2682285 (-) | 924 | WP_017421202.1 | ABC transporter ATP-binding protein | - |
| FORC54_RS13540 (FORC54_2455) | - | 2682454..2684124 (-) | 1671 | WP_026130631.1 | SulP family inorganic anion transporter | - |
| FORC54_RS13545 (FORC54_2456) | can | 2684366..2685034 (+) | 669 | WP_026060803.1 | carbonate dehydratase | - |
| FORC54_RS13550 (FORC54_2457) | hpt | 2685133..2685663 (-) | 531 | WP_011079559.1 | hypoxanthine phosphoribosyltransferase | - |
| FORC54_RS13555 (FORC54_2458) | opaR | 2686055..2686672 (+) | 618 | WP_011079558.1 | LuxR/HapR/OpaR family quorum-sensing transcriptional regulator | Regulator |
| FORC54_RS13560 (FORC54_2459) | lpdA | 2686804..2688231 (-) | 1428 | WP_011079557.1 | dihydrolipoyl dehydrogenase | - |
| FORC54_RS13565 (FORC54_2460) | aceF | 2688489..2690375 (-) | 1887 | WP_101958936.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
Sequence
Protein
Download Length: 205 a.a. Molecular weight: 23717.02 Da Isoelectric Point: 6.1461
>NTDB_id=213332 FORC54_RS13555 WP_011079558.1 2686055..2686672(+) (opaR) [Vibrio vulnificus strain FORC_054]
MDSIAKRPRTRLSPLKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDEVLNHVVRQFSNFLS
DNIDLDLHAKENIANITNAMIELVVQDNHWLKVWFEWSASTRDEVWPLFVTTNRTNQLLVQNMFIKAIERGEVCDQHNPE
DLANLFHGICYSLFVQANRTNNTAELSKLVSSYLDMLCIYKREHE
MDSIAKRPRTRLSPLKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDEVLNHVVRQFSNFLS
DNIDLDLHAKENIANITNAMIELVVQDNHWLKVWFEWSASTRDEVWPLFVTTNRTNQLLVQNMFIKAIERGEVCDQHNPE
DLANLFHGICYSLFVQANRTNNTAELSKLVSSYLDMLCIYKREHE
Nucleotide
Download Length: 618 bp
>NTDB_id=213332 FORC54_RS13555 WP_011079558.1 2686055..2686672(+) (opaR) [Vibrio vulnificus strain FORC_054]
ATGGACTCAATCGCAAAGAGACCGCGAACTCGCTTATCTCCGCTAAAACGTAAACAGCAGCTCATGGAAATTGCACTGGA
AGTGTTTGCTCGTCGTGGCATTGGCCGCGGTGGTCACGCAGACATCGCTGAAATTGCGCAAGTTTCTGTGGCGACCGTCT
TCAACTACTTCCCAACTCGCGAAGATCTTGTAGACGAAGTGCTTAATCATGTCGTTCGTCAGTTTTCTAATTTCCTATCT
GACAACATCGATTTGGATCTTCACGCTAAAGAAAACATCGCCAACATCACCAACGCAATGATTGAACTTGTGGTGCAAGA
CAATCACTGGTTGAAAGTTTGGTTCGAGTGGAGTGCGTCGACGCGTGACGAAGTTTGGCCTCTGTTTGTCACCACCAACC
GTACTAATCAGTTGCTGGTACAAAACATGTTCATCAAAGCCATTGAACGCGGTGAAGTGTGTGATCAACACAACCCAGAA
GATTTGGCAAACCTGTTCCACGGCATTTGTTACTCGCTGTTTGTTCAAGCAAACCGCACCAACAATACTGCAGAGCTGAG
CAAACTGGTCAGCAGCTACTTAGACATGCTATGCATCTATAAACGCGAACACGAATAG
ATGGACTCAATCGCAAAGAGACCGCGAACTCGCTTATCTCCGCTAAAACGTAAACAGCAGCTCATGGAAATTGCACTGGA
AGTGTTTGCTCGTCGTGGCATTGGCCGCGGTGGTCACGCAGACATCGCTGAAATTGCGCAAGTTTCTGTGGCGACCGTCT
TCAACTACTTCCCAACTCGCGAAGATCTTGTAGACGAAGTGCTTAATCATGTCGTTCGTCAGTTTTCTAATTTCCTATCT
GACAACATCGATTTGGATCTTCACGCTAAAGAAAACATCGCCAACATCACCAACGCAATGATTGAACTTGTGGTGCAAGA
CAATCACTGGTTGAAAGTTTGGTTCGAGTGGAGTGCGTCGACGCGTGACGAAGTTTGGCCTCTGTTTGTCACCACCAACC
GTACTAATCAGTTGCTGGTACAAAACATGTTCATCAAAGCCATTGAACGCGGTGAAGTGTGTGATCAACACAACCCAGAA
GATTTGGCAAACCTGTTCCACGGCATTTGTTACTCGCTGTTTGTTCAAGCAAACCGCACCAACAATACTGCAGAGCTGAG
CAAACTGGTCAGCAGCTACTTAGACATGCTATGCATCTATAAACGCGAACACGAATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
92.157 |
99.512 |
0.917 |
| hapR | Vibrio cholerae C6706 |
72.864 |
97.073 |
0.707 |
| hapR | Vibrio cholerae strain A1552 |
72.864 |
97.073 |
0.707 |