Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | BV884_RS08720 | Genome accession | NZ_CP019114 |
| Coordinates | 1782849..1783229 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain MDR-CQ | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1777849..1788229
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BV884_RS08690 (BV884_08730) | kdsB | 1778752..1779513 (+) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| BV884_RS08695 (BV884_08735) | - | 1779525..1780505 (+) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| BV884_RS08700 (BV884_08740) | - | 1780517..1780858 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| BV884_RS08705 (BV884_08745) | - | 1780876..1781649 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| BV884_RS08710 (BV884_08750) | - | 1781687..1782295 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| BV884_RS08715 (BV884_08755) | - | 1782305..1782859 (+) | 555 | WP_000841373.1 | type II secretion system protein | - |
| BV884_RS08720 (BV884_08760) | xcpV | 1782849..1783229 (+) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| BV884_RS08725 (BV884_08765) | xcpW | 1783229..1783930 (+) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| BV884_RS08730 (BV884_08770) | gspK | 1783930..1784889 (+) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| BV884_RS08735 (BV884_08775) | - | 1785120..1785716 (+) | 597 | WP_000908452.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| BV884_RS08740 (BV884_08780) | ung | 1785767..1786480 (+) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| BV884_RS08745 (BV884_08785) | - | 1786477..1787601 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| BV884_RS08750 (BV884_08790) | tadA | 1787608..1788111 (+) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=213164 BV884_RS08720 WP_000836911.1 1782849..1783229(+) (xcpV) [Acinetobacter baumannii strain MDR-CQ]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=213164 BV884_RS08720 WP_000836911.1 1782849..1783229(+) (xcpV) [Acinetobacter baumannii strain MDR-CQ]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |