Detailed information NTG0213165

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: BV884_RS08725
• Genome accession: NZ_CP019114
• Coordinates: 1783229..1783930 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain MDR-CQ
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1778229..1788930

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BV884_RS08690 (BV884_08730)	kdsB	1778752..1779513 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
BV884_RS08695 (BV884_08735)	-	1779525..1780505 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
BV884_RS08700 (BV884_08740)	-	1780517..1780858 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
BV884_RS08705 (BV884_08745)	-	1780876..1781649 (+)	774	WP_000497298.1	TatD family hydrolase	-
BV884_RS08710 (BV884_08750)	-	1781687..1782295 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
BV884_RS08715 (BV884_08755)	-	1782305..1782859 (+)	555	WP_000841373.1	type II secretion system protein	-
BV884_RS08720 (BV884_08760)	xcpV	1782849..1783229 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
BV884_RS08725 (BV884_08765)	xcpW	1783229..1783930 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
BV884_RS08730 (BV884_08770)	gspK	1783930..1784889 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
BV884_RS08735 (BV884_08775)	-	1785120..1785716 (+)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
BV884_RS08740 (BV884_08780)	ung	1785767..1786480 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
BV884_RS08745 (BV884_08785)	-	1786477..1787601 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
BV884_RS08750 (BV884_08790)	tadA	1787608..1788111 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
BV884_RS08755 (BV884_08795)	-	1788181..1788624 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=213165 BV884_RS08725 WP_000594589.1 1783229..1783930(+) (xcpW) [Acinetobacter baumannii strain MDR-CQ]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=213165 BV884_RS08725 WP_000594589.1 1783229..1783930(+) (xcpW) [Acinetobacter baumannii strain MDR-CQ]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996