Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   NP7_RS00525 Genome accession   NZ_CP024443
Coordinates   116523..118691 (+) Length   722 a.a.
NCBI ID   WP_100269277.1    Uniprot ID   -
Organism   Moraxella osloensis strain NP7     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 111523..123691
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NP7_RS00500 (NP7_00500) - 112451..113194 (+) 744 WP_413774028.1 FKBP-type peptidyl-prolyl cis-trans isomerase -
  NP7_RS00505 (NP7_00505) argA 113292..114650 (-) 1359 WP_100270779.1 amino-acid N-acetyltransferase -
  NP7_RS00510 (NP7_00510) - 115200..115733 (+) 534 WP_100269275.1 hypothetical protein -
  NP7_RS00515 (NP7_00515) - 115754..115906 (-) 153 Protein_99 patatin-like phospholipase family protein -
  NP7_RS00520 (NP7_00520) vapB 115995..116231 (-) 237 WP_100269276.1 type II toxin-antitoxin system VapB family antitoxin -
  NP7_RS00525 (NP7_00525) recG 116523..118691 (+) 2169 WP_100269277.1 ATP-dependent DNA helicase RecG Machinery gene
  NP7_RS00530 (NP7_00530) - 118912..119091 (+) 180 WP_100269278.1 hypothetical protein -
  NP7_RS00535 (NP7_00535) - 119327..121144 (+) 1818 WP_100269279.1 alkaline phosphatase D family protein -
  NP7_RS00540 (NP7_00540) - 121207..122868 (-) 1662 WP_100269280.1 electron transfer flavoprotein-ubiquinone oxidoreductase -

Sequence

Protein


Download         Length: 722 a.a.        Molecular weight: 79964.00 Da        Isoelectric Point: 7.1366

>NTDB_id=212864 NP7_RS00525 WP_100269277.1 116523..118691(+) (recG) [Moraxella osloensis strain NP7]
MTNPMIQPDTDIFNLPVTALAGVGSKIAEQLDQLGIERVFDLLLHLPRDYEDRSRLVNMCDVVDGQSALLQGTVVRVDNK
KMGLSVTLQDRTAQTTLRFFKVYRGLTEAMAVGNTLRVFGEISISKYGTQISHPEYEIITGHQPLTNTGLIPVYPAVKNL
HQNKLRSLIRLALQTVKQANPVMATISDAEWQTVQNALSKQFPLLAGSHNPFAEFSLLEAISFIHQPPIYTDLNKQILVL
AALKNRSHPTCQRLIIEEMLAHQLSLLYRKQQLYQHKAPRCDATSALANRLLANLPFTPTHAQNRVVAQIVKDLSTSVPM
LRLVQGDVGAGKTLVAALAACYALDSGWQVAVMAPTEILAEQHLNNFKNWFEPLGIGVGWLVGKQTAKAREKALQQVQDN
EVQIVVGTHALFQEHVNFAKLGLVIIDEQHRFGVEQRMALVDKGLAHTTPHQLIMTATPIPRTLAMSAFGDMDTSVIDEL
PPNRTPITTVTISRDRRDEVIERIAANCEQGKQAYWVCPLVEESTVLDAQAAEATYADLNDRLNLNIGLVHGKMKPNDKQ
AVMADFKAGKTALLVATTVIEVGVDVPNASLMVIENAERLGLSQLHQLRGRVGRGTQKSFCVLLYQTPLSETGIERLNVL
RDSNDGFVIAQKDLELRGAGELLGKRQTGFDSYYVSDLARDESLLIVAQAIAKYLIADENRKSQVQQYISHWTPDAIKYI
NA

Nucleotide


Download         Length: 2169 bp        

>NTDB_id=212864 NP7_RS00525 WP_100269277.1 116523..118691(+) (recG) [Moraxella osloensis strain NP7]
ATGACCAACCCCATGATTCAACCCGATACTGACATCTTTAATCTCCCTGTCACCGCACTTGCTGGCGTGGGTAGCAAAAT
CGCTGAGCAGCTTGACCAACTTGGTATTGAGCGCGTGTTTGATTTGTTGCTACATTTGCCGCGTGATTATGAAGATCGCA
GCCGACTGGTCAACATGTGTGATGTCGTCGATGGACAATCGGCATTGCTACAAGGCACCGTTGTCCGCGTCGACAACAAA
AAGATGGGCCTCAGCGTGACATTGCAAGATAGGACAGCGCAAACAACATTACGCTTTTTTAAGGTATATCGTGGACTGAC
CGAAGCCATGGCGGTGGGCAATACCTTGCGTGTGTTTGGCGAAATCAGTATAAGTAAGTATGGCACCCAAATCAGCCACC
CTGAATATGAAATTATTACTGGACATCAACCCTTGACCAATACAGGGCTGATACCTGTTTATCCAGCGGTCAAAAACTTG
CACCAAAATAAACTGCGTAGCTTGATTCGACTTGCGCTGCAAACGGTTAAACAAGCCAATCCTGTGATGGCTACTATTAG
TGATGCTGAGTGGCAAACAGTACAAAATGCGCTCAGCAAGCAGTTTCCGTTACTGGCAGGTAGCCACAACCCATTTGCGG
AATTTAGCTTGCTAGAAGCCATTAGCTTTATTCATCAGCCACCGATTTATACCGATTTGAATAAGCAAATTTTGGTGTTA
GCGGCGTTAAAAAATCGCAGCCATCCGACCTGTCAGCGGCTCATTATCGAAGAAATGCTGGCGCACCAGCTGAGTCTTCT
GTACCGCAAACAACAACTTTATCAGCACAAAGCACCGCGCTGCGATGCCACAAGCGCGCTTGCCAATCGGCTGTTAGCCA
ATTTACCTTTTACCCCGACCCATGCCCAAAATCGGGTAGTGGCGCAAATCGTCAAAGATTTGTCAACCTCAGTACCCATG
CTGCGACTTGTGCAAGGCGATGTTGGCGCAGGCAAAACCTTGGTGGCAGCTTTGGCGGCATGCTATGCGCTTGATAGCGG
CTGGCAAGTGGCGGTGATGGCACCGACAGAGATTTTGGCGGAGCAACATCTTAATAATTTTAAAAACTGGTTTGAACCGC
TTGGCATCGGTGTGGGTTGGCTAGTAGGTAAGCAAACAGCCAAAGCGCGTGAAAAAGCCTTGCAACAAGTACAAGACAAC
GAGGTGCAAATCGTGGTCGGTACGCATGCGCTATTTCAAGAGCATGTCAATTTTGCCAAGTTGGGCTTGGTGATTATCGA
TGAGCAGCACCGTTTTGGGGTGGAGCAGCGAATGGCGCTGGTCGATAAAGGCTTGGCGCATACCACACCGCATCAGCTGA
TTATGACAGCCACACCCATACCGCGTACCCTTGCCATGAGTGCATTTGGTGATATGGATACGTCCGTCATTGATGAGCTG
CCGCCCAACCGCACCCCTATCACCACCGTCACCATAAGCCGTGACCGACGTGATGAAGTGATTGAACGTATCGCTGCCAA
CTGCGAGCAAGGCAAACAAGCTTACTGGGTGTGCCCACTGGTCGAAGAATCTACCGTGCTTGATGCGCAAGCCGCTGAAG
CGACCTATGCCGATTTGAATGACAGGCTCAATCTCAACATTGGCTTGGTGCATGGCAAAATGAAACCCAATGACAAACAA
GCGGTCATGGCGGATTTTAAAGCCGGTAAAACTGCTTTGCTGGTGGCTACCACCGTGATTGAAGTCGGGGTCGATGTGCC
CAATGCCTCGCTGATGGTGATTGAAAATGCTGAGCGATTAGGGTTATCGCAATTGCACCAGCTACGCGGACGCGTGGGGC
GTGGCACCCAAAAAAGCTTTTGCGTATTGCTTTATCAAACGCCATTGTCAGAAACGGGTATAGAGCGGCTCAATGTGCTG
CGAGATAGCAATGATGGCTTTGTGATTGCGCAAAAAGACTTGGAACTACGCGGTGCAGGGGAGCTTTTGGGTAAACGGCA
GACGGGATTTGATAGCTACTATGTCAGTGACCTAGCCAGAGATGAAAGCTTGCTAATCGTGGCGCAAGCGATTGCTAAGT
ACCTAATTGCTGATGAAAATCGCAAATCACAAGTACAGCAATATATCAGCCATTGGACACCCGATGCCATTAAATACATT
AACGCGTGA

Domains

Predicted by InterProScan.

RecG wedge domain (RecG_wedge)

(21-175)

Helicase conserved C-terminal domain (Helicase_C)

(506-615)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(644-707)

DEAD/DEAH box helicase (DEAD)

(323-462)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

44.778

96.814

0.434
  recG Bacillus subtilis subsp. subtilis str. 168

38.04

96.122

0.366