Detailed information
Bioinformatically predicted
Overview
| Name | comE | Type | Machinery gene |
| Locus tag | BVL33_RS02970 | Genome accession | NZ_CP019041 |
| Coordinates | 617142..617597 (+) | Length | 151 a.a. |
| NCBI ID | WP_075696047.1 | Uniprot ID | - |
| Organism | Acinetobacter junii strain 65 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 612142..622597
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BVL33_RS02960 (BVL33_02960) | - | 612400..613170 (+) | 771 | WP_075696045.1 | pilus assembly PilX family protein | - |
| BVL33_RS02965 (BVL33_02965) | - | 613186..617127 (+) | 3942 | WP_075696046.1 | PilC/PilY family type IV pilus protein | - |
| BVL33_RS02970 (BVL33_02970) | comE | 617142..617597 (+) | 456 | WP_075696047.1 | type IV pilin protein | Machinery gene |
| BVL33_RS02975 (BVL33_02975) | - | 617597..618049 (+) | 453 | WP_081378472.1 | type IV pilin protein | - |
| BVL33_RS02980 (BVL33_02980) | rpsP | 618265..618522 (+) | 258 | WP_004964546.1 | 30S ribosomal protein S16 | - |
| BVL33_RS02985 (BVL33_02985) | rimM | 618539..619087 (+) | 549 | WP_075696049.1 | ribosome maturation factor RimM | - |
| BVL33_RS02990 (BVL33_02990) | trmD | 619130..619870 (+) | 741 | WP_004951622.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| BVL33_RS02995 (BVL33_02995) | rplS | 620101..620472 (+) | 372 | WP_004660214.1 | 50S ribosomal protein L19 | - |
| BVL33_RS03000 (BVL33_03000) | - | 620532..621503 (-) | 972 | WP_075696872.1 | lipase family alpha/beta hydrolase | - |
Sequence
Protein
Download Length: 151 a.a. Molecular weight: 16384.60 Da Isoelectric Point: 9.9146
>NTDB_id=212805 BVL33_RS02970 WP_075696047.1 617142..617597(+) (comE) [Acinetobacter junii strain 65]
MNNNVSNHKGFTLIELMVVVVIVAIFAAIAIPSYQQYVRRAQASQAQQEVQRLAGELARWKSRNFNYLGFNLPANTIQGG
YPAASFEIRDGAAGNPQLTATAATGQSWVIRVLHTDGKNYSYLLTSTGIQCKNKTKANITFAACGAGSEAW
MNNNVSNHKGFTLIELMVVVVIVAIFAAIAIPSYQQYVRRAQASQAQQEVQRLAGELARWKSRNFNYLGFNLPANTIQGG
YPAASFEIRDGAAGNPQLTATAATGQSWVIRVLHTDGKNYSYLLTSTGIQCKNKTKANITFAACGAGSEAW
Nucleotide
Download Length: 456 bp
>NTDB_id=212805 BVL33_RS02970 WP_075696047.1 617142..617597(+) (comE) [Acinetobacter junii strain 65]
ATGAATAATAATGTATCCAATCATAAAGGCTTTACATTAATTGAGCTTATGGTGGTCGTCGTGATTGTTGCAATATTTGC
AGCAATCGCTATCCCGAGTTATCAGCAGTACGTGCGTCGTGCTCAAGCATCTCAGGCACAACAAGAGGTTCAGCGATTGG
CTGGAGAGTTAGCAAGGTGGAAATCTAGGAATTTTAATTATTTAGGATTTAATTTACCTGCTAATACAATACAAGGTGGC
TATCCTGCTGCCTCTTTTGAGATTCGAGATGGGGCAGCGGGTAATCCTCAACTGACGGCTACGGCAGCAACAGGTCAAAG
CTGGGTGATTCGTGTTTTACATACGGATGGTAAAAATTATTCATATTTGCTAACCAGTACAGGAATCCAATGTAAAAATA
AAACCAAAGCCAATATTACATTTGCAGCTTGTGGTGCTGGTTCGGAGGCTTGGTAA
ATGAATAATAATGTATCCAATCATAAAGGCTTTACATTAATTGAGCTTATGGTGGTCGTCGTGATTGTTGCAATATTTGC
AGCAATCGCTATCCCGAGTTATCAGCAGTACGTGCGTCGTGCTCAAGCATCTCAGGCACAACAAGAGGTTCAGCGATTGG
CTGGAGAGTTAGCAAGGTGGAAATCTAGGAATTTTAATTATTTAGGATTTAATTTACCTGCTAATACAATACAAGGTGGC
TATCCTGCTGCCTCTTTTGAGATTCGAGATGGGGCAGCGGGTAATCCTCAACTGACGGCTACGGCAGCAACAGGTCAAAG
CTGGGTGATTCGTGTTTTACATACGGATGGTAAAAATTATTCATATTTGCTAACCAGTACAGGAATCCAATGTAAAAATA
AAACCAAAGCCAATATTACATTTGCAGCTTGTGGTGCTGGTTCGGAGGCTTGGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE | Acinetobacter baylyi ADP1 |
48.521 |
100 |
0.543 |
| pilY2 | Acinetobacter baumannii D1279779 |
45.098 |
100 |
0.457 |