Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   BVD85_RS10370 Genome accession   NZ_CP018908
Coordinates   2070311..2071075 (+) Length   254 a.a.
NCBI ID   WP_012775418.1    Uniprot ID   A0A0Z9LUD5
Organism   Streptococcus suis strain SS2-1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2065311..2076075
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BVD85_RS10355 (BVD85_10355) - 2067693..2068376 (-) 684 WP_012775416.1 YoaK family protein -
  BVD85_RS10360 (BVD85_10360) rlmH 2068401..2068880 (-) 480 WP_075340283.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  BVD85_RS10365 (BVD85_10365) htrA 2069054..2070250 (+) 1197 WP_012028059.1 S1C family serine protease Regulator
  BVD85_RS10370 (BVD85_10370) spo0J 2070311..2071075 (+) 765 WP_012775418.1 ParB/RepB/Spo0J family partition protein Regulator
  BVD85_RS10375 (BVD85_10375) dnaA 2071278..2072651 (+) 1374 WP_011921628.1 chromosomal replication initiator protein DnaA -
  BVD85_RS10380 (BVD85_10380) dnaN 2072805..2073941 (+) 1137 WP_004194538.1 DNA polymerase III subunit beta -
  BVD85_RS10385 (BVD85_10385) - 2074033..2074914 (+) 882 WP_011921629.1 diacylglycerol/lipid kinase family protein -
  BVD85_RS10390 (BVD85_10390) - 2074924..2075127 (+) 204 WP_011922523.1 DUF951 domain-containing protein -
  BVD85_RS10395 (BVD85_10395) - 2075231..2075590 (+) 360 WP_012774878.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 254 a.a.        Molecular weight: 28966.25 Da        Isoelectric Point: 9.4760

>NTDB_id=211738 BVD85_RS10370 WP_012775418.1 2070311..2071075(+) (spo0J) [Streptococcus suis strain SS2-1]
MEELRTLNISEIHPNPYQPRIHFDEKELLELAQSIKENGLIQPIIVRKSSIIGYELLAGERRLRASQLAGLTTIPAVVKE
LTDDDLLYQAIIENLQRSNLNPIEEAASYQKLISRGLTHDEVAQIMGKSRPYISNLLRLLNLSSQTKQAVEEGKISQGHA
RQLVSFSEEKQAEWVQLILSKDLSVRTLEKLIAANKKKHTKLKQRDQFLKEQEDSLSKTLGTATKIIKKKNGSGEIRISF
NDLDEFERIINNFK

Nucleotide


Download         Length: 765 bp        

>NTDB_id=211738 BVD85_RS10370 WP_012775418.1 2070311..2071075(+) (spo0J) [Streptococcus suis strain SS2-1]
ATGGAAGAATTACGTACACTAAATATTTCAGAAATCCATCCCAATCCCTATCAGCCAAGAATTCATTTTGATGAAAAGGA
GCTACTTGAGCTCGCTCAATCTATTAAGGAAAATGGCTTAATTCAACCGATTATTGTAAGAAAATCTTCTATTATCGGAT
ACGAATTATTAGCTGGAGAAAGAAGGTTGCGAGCCAGTCAATTAGCTGGACTGACTACAATACCAGCAGTGGTAAAAGAA
CTGACTGATGATGATTTACTCTATCAGGCTATCATAGAGAATCTGCAGCGTTCTAACTTAAATCCGATAGAAGAAGCAGC
CTCTTATCAAAAATTGATTAGTAGAGGGTTAACACATGATGAAGTTGCTCAAATCATGGGAAAATCAAGACCATATATCA
GTAATTTATTGCGCCTACTAAATCTATCATCTCAGACTAAACAAGCTGTAGAAGAAGGAAAAATTTCACAAGGGCACGCG
CGACAATTGGTGTCATTTTCAGAAGAAAAGCAAGCCGAATGGGTTCAACTCATTTTATCAAAGGATTTAAGTGTGCGTAC
GCTTGAAAAATTAATAGCTGCAAATAAGAAAAAACACACTAAGCTTAAACAACGCGACCAATTTTTAAAAGAACAGGAAG
ATTCACTCAGTAAAACTCTTGGAACAGCTACAAAAATTATCAAGAAGAAAAACGGGAGCGGAGAAATTCGGATTAGCTTT
AATGACCTCGATGAATTCGAAAGAATTATCAACAATTTTAAATAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(146-193)

ParB/Sulfiredoxin domain (ParB_N)

(7-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0Z9LUD5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

55.159

99.213

0.547

Multiple sequence alignment