Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | BVD88_RS10475 | Genome accession | NZ_CP018907 |
| Coordinates | 1761267..1761866 (+) | Length | 199 a.a. |
| NCBI ID | WP_002214520.1 | Uniprot ID | Q4W563 |
| Organism | Neisseria meningitidis strain M21273 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1756267..1766866
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BVD88_RS10460 (BVD88_10915) | yihA | 1756851..1757480 (+) | 630 | WP_002222977.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
| BVD88_RS10465 (BVD88_10920) | - | 1757601..1759997 (-) | 2397 | WP_002219786.1 | penicillin-binding protein 1A | - |
| BVD88_RS10470 (BVD88_10925) | pilM | 1760149..1761264 (+) | 1116 | WP_002214517.1 | type IV pilus biogenesis protein PilM | - |
| BVD88_RS10475 (BVD88_10930) | pilN | 1761267..1761866 (+) | 600 | WP_002214520.1 | PilN domain-containing protein | Machinery gene |
| BVD88_RS10480 (BVD88_10935) | - | 1761867..1762514 (+) | 648 | WP_002217908.1 | type 4a pilus biogenesis protein PilO | - |
| BVD88_RS10485 (BVD88_10940) | pilP | 1762532..1763077 (+) | 546 | WP_002214522.1 | pilus assembly protein PilP | Machinery gene |
| BVD88_RS10490 (BVD88_10945) | pilQ | 1763096..1765405 (+) | 2310 | WP_002221480.1 | type IV pilus secretin PilQ | Machinery gene |
| BVD88_RS10500 (BVD88_10960) | - | 1766307..1766819 (+) | 513 | WP_002214526.1 | shikimate kinase | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 22257.48 Da Isoelectric Point: 9.5493
>NTDB_id=211678 BVD88_RS10475 WP_002214520.1 1761267..1761866(+) (pilN) [Neisseria meningitidis strain M21273]
MNNLIKINLLPYREEMNKRKQQQFKTLMYGAVLTGVAAVAATYLFIDNMINNQSERNTLLETSIAHLDTELSEIQKLKQE
KDAFLIKKNKIEELQLKRLQAAKILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN
MNNLIKINLLPYREEMNKRKQQQFKTLMYGAVLTGVAAVAATYLFIDNMINNQSERNTLLETSIAHLDTELSEIQKLKQE
KDAFLIKKNKIEELQLKRLQAAKILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN
Nucleotide
Download Length: 600 bp
>NTDB_id=211678 BVD88_RS10475 WP_002214520.1 1761267..1761866(+) (pilN) [Neisseria meningitidis strain M21273]
ATGAACAATTTAATCAAAATCAACCTCCTCCCCTACAGGGAAGAGATGAACAAGCGCAAACAGCAGCAGTTTAAAACGCT
GATGTACGGTGCCGTGCTGACGGGCGTTGCCGCCGTTGCGGCAACCTACCTGTTTATCGACAATATGATCAATAACCAGT
CGGAAAGAAACACGCTGCTGGAAACCTCCATCGCACACTTGGATACCGAGCTGTCGGAAATACAAAAGCTCAAACAGGAA
AAAGATGCCTTCCTGATTAAGAAAAACAAAATCGAGGAGCTCCAGCTCAAACGCCTCCAAGCCGCAAAAATCCTCGACAG
CCTGAATGAGGCCGTCCCCGGAAGCACCTACCTGACCTCGCTGGATGCCGTTACCGCCGACTCTTATCGGCTCAGCGGCA
GGACATCCAGCGACAACCGCGTTGCCGCCATGATGAGGGCGATGCCCAATACCGGCATATTCAAGCAACCCGAATTGTTA
AGCATCAAGAAAAACAATTCGCATCAAGAATTTACCCTTCAGGCAACATTACAACCCATCGTAAAGGCGGCCGAATCCAA
AGAGAATCCGGCTTCGGGAAACGCACAGGAGGCAAACTGA
ATGAACAATTTAATCAAAATCAACCTCCTCCCCTACAGGGAAGAGATGAACAAGCGCAAACAGCAGCAGTTTAAAACGCT
GATGTACGGTGCCGTGCTGACGGGCGTTGCCGCCGTTGCGGCAACCTACCTGTTTATCGACAATATGATCAATAACCAGT
CGGAAAGAAACACGCTGCTGGAAACCTCCATCGCACACTTGGATACCGAGCTGTCGGAAATACAAAAGCTCAAACAGGAA
AAAGATGCCTTCCTGATTAAGAAAAACAAAATCGAGGAGCTCCAGCTCAAACGCCTCCAAGCCGCAAAAATCCTCGACAG
CCTGAATGAGGCCGTCCCCGGAAGCACCTACCTGACCTCGCTGGATGCCGTTACCGCCGACTCTTATCGGCTCAGCGGCA
GGACATCCAGCGACAACCGCGTTGCCGCCATGATGAGGGCGATGCCCAATACCGGCATATTCAAGCAACCCGAATTGTTA
AGCATCAAGAAAAACAATTCGCATCAAGAATTTACCCTTCAGGCAACATTACAACCCATCGTAAAGGCGGCCGAATCCAA
AGAGAATCCGGCTTCGGGAAACGCACAGGAGGCAAACTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Neisseria meningitidis strain C311 |
100 |
100 |
1 |