Detailed information NTG0211168

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: AHTJS_RS08685
• Genome accession: NZ_CP018871
• Coordinates: 1767575..1768369 (-)
• Length: 264 a.a.
• NCBI ID: WP_075315663.1
• Uniprot ID: -
• Organism: Acinetobacter haemolyticus strain TJS01
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1762575..1773369

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AHTJS_RS08655 (AHTJS_08640)	-	1763008..1763448 (-)	441	WP_075315661.1	SRPBCC family protein	-
AHTJS_RS08660 (AHTJS_08645)	tadA	1763516..1764028 (-)	513	WP_005080470.1	tRNA adenosine(34) deaminase TadA	-
AHTJS_RS08665 (AHTJS_08650)	-	1764033..1765157 (-)	1125	WP_171055793.1	enoyl-CoA hydratase/isomerase family protein	-
AHTJS_RS08670 (AHTJS_08655)	ung	1765154..1765867 (-)	714	WP_075316509.1	uracil-DNA glycosylase	-
AHTJS_RS08675 (AHTJS_08660)	-	1765914..1766510 (-)	597	WP_017394547.1	6-pyruvoyl trahydropterin synthase family protein	-
AHTJS_RS08680 (AHTJS_08665)	gspK	1766596..1767573 (-)	978	WP_075315662.1	type II secretion system minor pseudopilin GspK	-
AHTJS_RS08685 (AHTJS_08670)	xcpW	1767575..1768369 (-)	795	WP_075315663.1	type II secretion system minor pseudopilin GspJ	Machinery gene
AHTJS_RS08690 (AHTJS_08675)	xcpV	1768375..1768794 (-)	420	WP_228127575.1	type II secretion system minor pseudopilin GspI	Machinery gene
AHTJS_RS08695 (AHTJS_08680)	-	1768862..1769473 (-)	612	WP_075315664.1	type II secretion system protein	-
AHTJS_RS08700 (AHTJS_08685)	-	1769488..1770093 (-)	606	WP_017394545.1	TetR/AcrR family transcriptional regulator	-
AHTJS_RS08705 (AHTJS_08690)	-	1770135..1770908 (-)	774	WP_005080456.1	TatD family hydrolase	-
AHTJS_RS08710 (AHTJS_08695)	-	1770929..1771273 (-)	345	WP_004639306.1	PilZ domain-containing protein	-
AHTJS_RS08715 (AHTJS_08700)	-	1771596..1771904 (-)	309	WP_075315665.1	hypothetical protein	-
AHTJS_RS08720 (AHTJS_08705)	-	1772048..1773031 (-)	984	WP_075315666.1	DNA polymerase III subunit delta'	-

Sequence

Protein

• Length: 264 a.a.
• Molecular weight: 30454.76 Da
• Isoelectric Point: 8.8947

>NTDB_id=211168 AHTJS_RS08685 WP_075315663.1 1767575..1768369(-) (xcpW) [Acinetobacter haemolyticus strain TJS01]
MNNKNNNMQISKFHFVNPRTQSLASQPSCEAMLLRSSSARLNRDHSEHSSSSCARTKFHFVNPRSGFTLVELLVAIAIFA
VLSMLGWKVFDYLLKVKDRNAEHEVNLFALQDAYQQILRDSLQIIPLTANDGRQLQAALVLNDQVFMFSKAGVSDPLKQG
LSPYERIEYRFDESQKRLYRLKYTNLNIPNRVQPMSSVLLDNVERFKVSVFNPQELMQWPENNVDPENTAELRKLPLGLK
IQLTVAGTDYEWIYRLIDRSQDSQ

Nucleotide

• Length: 795 bp

>NTDB_id=211168 AHTJS_RS08685 WP_075315663.1 1767575..1768369(-) (xcpW) [Acinetobacter haemolyticus strain TJS01]
ATGAATAATAAAAACAATAATATGCAAATCTCAAAGTTTCACTTTGTTAATCCTCGCACTCAAAGCCTAGCTTCTCAGCC
TTCTTGCGAAGCGATGCTTCTCAGGTCGAGCAGTGCTCGGCTTAATCGTGATCACTCCGAACATAGTTCGTCATCTTGCG
CTCGGACAAAGTTTCACTTTGTTAATCCTCGCTCAGGATTTACGTTGGTTGAGTTGCTGGTTGCAATTGCAATTTTTGCA
GTTCTTTCTATGTTAGGTTGGAAAGTATTTGATTATTTGTTAAAAGTGAAAGATCGAAATGCTGAACATGAAGTGAATTT
GTTTGCATTACAAGACGCTTATCAGCAGATCTTGCGAGATAGTTTGCAGATCATCCCTTTAACAGCAAATGATGGAAGGC
AATTGCAAGCTGCATTGGTACTTAATGATCAGGTTTTTATGTTTAGTAAAGCTGGTGTTTCTGATCCGCTTAAGCAAGGG
TTGTCGCCATACGAGCGCATCGAATATCGTTTTGATGAGTCTCAAAAAAGACTATATCGATTGAAATACACAAATCTAAA
TATTCCAAATCGTGTGCAGCCGATGTCAAGTGTATTGTTGGATAATGTTGAGCGCTTTAAAGTATCTGTTTTCAATCCAC
AAGAGTTAATGCAGTGGCCTGAAAATAATGTAGATCCAGAAAACACGGCTGAATTAAGAAAGTTACCATTAGGATTGAAA
ATTCAATTGACTGTTGCTGGTACAGATTATGAGTGGATCTATCGTCTGATCGATCGTAGTCAGGATAGTCAATGA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (119-248)

• Prokaryotic N-terminal methylation motif (N_methyl) (63-85)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	65.766	84.091	0.553