Detailed information
Bioinformatically predicted
Overview
| Name | lpp1978 | Type | Machinery gene |
| Locus tag | LPG_RS10020 | Genome accession | NC_002942 |
| Coordinates | 2237116..2237430 (-) | Length | 104 a.a. |
| NCBI ID | WP_010947713.1 | Uniprot ID | Q5ZU11 |
| Organism | Legionella pneumophila subsp. pneumophila str. Philadelphia | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2232116..2242430
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPG_RS09995 (lpg1992) | - | 2232545..2233045 (-) | 501 | WP_015444348.1 | hypothetical protein | - |
| LPG_RS10000 (lpg1993) | - | 2233537..2234397 (+) | 861 | WP_015444347.1 | polysaccharide deacetylase family protein | - |
| LPG_RS10005 (lpg1994) | - | 2234514..2235707 (-) | 1194 | WP_010947710.1 | murein transglycosylase A | - |
| LPG_RS10010 (lpg1995) | lpp1976 | 2235817..2236374 (-) | 558 | WP_010947711.1 | hypothetical protein | Machinery gene |
| LPG_RS10015 (lpg1996) | lpp1977 | 2236371..2237177 (-) | 807 | WP_010947712.1 | PilW family protein | Machinery gene |
| LPG_RS10020 (lpg1997) | lpp1978 | 2237116..2237430 (-) | 315 | WP_010947713.1 | type IV pilus modification PilV family protein | Machinery gene |
| LPG_RS10025 (lpg1998) | hisC | 2237590..2238699 (+) | 1110 | WP_015444344.1 | histidinol-phosphate transaminase | - |
| LPG_RS10030 (lpg1999) | - | 2238736..2239077 (+) | 342 | WP_010947715.1 | 4a-hydroxytetrahydrobiopterin dehydratase | - |
| LPG_RS10035 (lpg2000) | secF | 2239250..2240167 (-) | 918 | WP_010947716.1 | protein translocase subunit SecF | - |
| LPG_RS10040 (lpg2001) | secD | 2240180..2242036 (-) | 1857 | WP_010947717.1 | protein translocase subunit SecD | - |
| LPG_RS10045 (lpg2002) | yajC | 2242058..2242393 (-) | 336 | WP_010947718.1 | preprotein translocase subunit YajC | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 12330.42 Da Isoelectric Point: 9.4609
>NTDB_id=21110 LPG_RS10020 WP_010947713.1 2237116..2237430(-) (lpp1978) [Legionella pneumophila subsp. pneumophila str. Philadelphia]
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLDAH
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLDAH
Nucleotide
Download Length: 315 bp
>NTDB_id=21110 LPG_RS10020 WP_010947713.1 2237116..2237430(-) (lpp1978) [Legionella pneumophila subsp. pneumophila str. Philadelphia]
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGAGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAGTCAATTATTCGCTCCTATGATCTGGATGCTCATTGA
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGAGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAGTCAATTATTCGCTCCTATGATCTGGATGCTCATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lpp1978 | Legionella pneumophila strain ERS1305867 |
96.154 |
100 |
0.962 |
| lpp1978 | Legionella pneumophila str. Paris |
94.231 |
100 |
0.942 |