Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   BC6307_RS04460 Genome accession   NZ_CP018866
Coordinates   928725..928913 (+) Length   62 a.a.
NCBI ID   WP_066416667.1    Uniprot ID   A0A223KMK2
Organism   Sutcliffiella cohnii strain DSM 6307     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 923725..933913
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BC6307_RS04440 (BC6307_04445) - 925451..925633 (-) 183 WP_066416675.1 YjzD family protein -
  BC6307_RS25465 - 925749..925874 (+) 126 WP_268874275.1 hypothetical protein -
  BC6307_RS04445 (BC6307_04450) - 926061..926798 (+) 738 WP_066416674.1 alpha/beta fold hydrolase -
  BC6307_RS04450 (BC6307_04455) - 926904..927677 (+) 774 WP_066416673.1 hypothetical protein -
  BC6307_RS04455 (BC6307_04460) med 927757..928713 (+) 957 WP_066416669.1 BMP family ABC transporter substrate-binding protein Regulator
  BC6307_RS04460 (BC6307_04465) comZ 928725..928913 (+) 189 WP_066416667.1 ComZ family protein Regulator
  BC6307_RS04465 (BC6307_04470) - 928929..929183 (-) 255 WP_066416664.1 hypothetical protein -
  BC6307_RS04470 (BC6307_04475) - 929455..930387 (+) 933 WP_066416663.1 beta-ketoacyl-ACP synthase III -
  BC6307_RS04475 (BC6307_04480) fabF 930421..931656 (+) 1236 WP_066416662.1 beta-ketoacyl-ACP synthase II -
  BC6307_RS04480 (BC6307_04485) - 931835..932626 (+) 792 WP_066416661.1 DUF2268 domain-containing putative Zn-dependent protease -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7197.40 Da        Isoelectric Point: 4.2412

>NTDB_id=211073 BC6307_RS04460 WP_066416667.1 928725..928913(+) (comZ) [Sutcliffiella cohnii strain DSM 6307]
MEKNMLYMQIAMKHLPEAKQFLEESGVELNLEQIQPMISLLTKVMDEAYELGLQEGLARKED

Nucleotide


Download         Length: 189 bp        

>NTDB_id=211073 BC6307_RS04460 WP_066416667.1 928725..928913(+) (comZ) [Sutcliffiella cohnii strain DSM 6307]
ATGGAAAAAAATATGTTGTATATGCAAATTGCCATGAAACATTTACCTGAAGCGAAACAGTTCCTTGAAGAGTCAGGGGT
AGAGTTGAATCTTGAACAAATTCAACCAATGATTTCTTTACTAACGAAAGTAATGGATGAAGCATACGAACTTGGCTTAC
AAGAAGGTTTAGCACGTAAAGAGGACTAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(2-55)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A223KMK2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

55

96.774

0.532

Multiple sequence alignment